Protein

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Genbank accession
QIG69576.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSLYIKQSGVWTPVPTLKIKNAGSWSQVQVGYVKVSGVWRQFYVPEVLVTITANTLNVNIQSLFTSGVWTNPAVAKRVVINSGVIVGSSVPATAALRTGTGWAGTLTLENKGEIQGAGGVANSGAGGHAILCEAAGMIIKNTGAIRGGGGGGGKGGNGGAGYYTSTVSEGPIYQGYPASSTNRYYWDTTNGTSIDAVYWNDANVISGNVNSPYTVGAYTYTRGVQRASYTAGSTTHNVFEVSRSYQTTTNTSGGIGGNGGRGQGYGQTNASGSAGTAGGTNAGAGGTGGTGANFGAAGATGNSGANGNNGSGTAGTAGGAAGKAISGSSSLTNTGTIQGATS
Physico‐chemical
properties
protein length:342 AA
molecular weight: 33650,30310 Da
isoelectric point:9,60406
aromaticity:0,07895
hydropathy:-0,17193

Domains

Domains [InterPro]
DC_1762
ATT
1–160
DC_1762 DC_0422
IPR007932
RBD
47–181
IPR007932
QIG69576.1
1 342
Architecture
ATT
RBD
RBD
ATT 1-160 | RBD 161-181 | RBD 190-342
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I46
[NCBI] 		2509737 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG69576.1 [NCBI]
Genbank nucleotide accession
MN988509.1 [NCBI]
CDS location
range 4078 -> 5106
strand -
CDS
ATGTCACTTTACATTAAACAATCAGGCGTCTGGACTCCAGTTCCTACTCTAAAGATCAAGAACGCTGGAAGTTGGTCTCAGGTTCAAGTCGGCTACGTGAAAGTCAGCGGGGTCTGGAGACAGTTTTACGTTCCAGAAGTCTTGGTGACTATCACTGCAAACACACTGAACGTTAACATCCAGAGCCTCTTTACGAGCGGTGTCTGGACGAATCCAGCAGTGGCGAAACGAGTCGTCATCAATTCCGGTGTCATCGTAGGTAGTTCAGTTCCTGCTACAGCAGCTCTCCGTACAGGTACTGGGTGGGCTGGAACTCTCACGCTCGAGAACAAAGGCGAAATTCAGGGTGCTGGAGGTGTAGCCAACTCTGGTGCCGGTGGTCATGCTATTCTCTGCGAAGCAGCAGGAATGATCATCAAGAATACCGGTGCTATCCGTGGTGGCGGTGGTGGCGGAGGCAAAGGCGGTAACGGCGGCGCTGGCTACTATACAAGCACTGTTTCTGAAGGTCCGATCTATCAAGGGTATCCTGCAAGCAGCACAAATCGATATTATTGGGACACGACTAACGGAACAAGTATTGATGCTGTGTACTGGAATGACGCTAACGTCATCAGTGGAAACGTAAACTCTCCTTATACTGTAGGTGCTTACACGTATACTCGTGGAGTTCAACGAGCCAGTTACACAGCAGGCAGTACAACTCACAATGTTTTCGAAGTGTCTAGATCTTATCAGACGACTACCAATACCTCAGGCGGTATTGGCGGTAACGGTGGTAGAGGTCAAGGATACGGCCAGACGAACGCCTCTGGTTCAGCCGGTACGGCTGGTGGTACGAACGCAGGTGCTGGTGGTACTGGCGGAACTGGAGCCAACTTCGGAGCTGCAGGAGCCACTGGTAACTCAGGTGCGAACGGTAACAACGGTTCTGGTACTGCTGGTACGGCCGGTGGTGCAGCTGGCAAGGCTATCTCTGGATCGAGCTCGTTGACAAATACCGGTACAATCCAAGGTGCTACTTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16acd15823c4ea2a9e9c45d4c7b9e8104ebd70187ca5c61c494d08af92cc589c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank