Protein

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Genbank accession
YP_009907788.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNILKKLMQRLCGCGKHDDREHGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK
Physico‐chemical
properties
protein length:89 AA
molecular weight: 10003,52750 Da
isoelectric point:5,59861
aromaticity:0,01124
hydropathy:-0,32472

Domains

Domains [InterPro]
DC_0291
ATT
1–27
DC_0291 IPR009640
YP_009907788.1
1 89
Architecture
ATT
RBD
ATT 1-27 | RBD 28-89
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Lyz12581Vzw
[NCBI] 		2590400 Uroviricota > Caudoviricetes > Sepvirinae > Oslovirus Lyz12581Vzw >
Host Escherichia coli O145
[NCBI] 		1055538 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009907788.1 [NCBI]
Genbank nucleotide accession
NC_049917.1 [NCBI]
CDS location
range 131 -> 400
strand -
CDS
ATGAACATACTAAAAAAACTTATGCAGCGTCTGTGTGGTTGCGGAAAGCATGATGACCGTGAACACGGGGAGTTACTTACAGCACAGCTGCGACTGGGGCCGGCAGACATCCTGGAGTCAGATGAGAATGGCATTATCCCGGAGCAGGACAGGGTAATCACGCAGGTGGTGATACTGGATGCGGATAAAAAGCAGATACAGTGCGTGGTAAGACCGCTGCAAATCCTGCGTGCTGACGGGACGTGGGAAAATATTGGCGGGATGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8478e471738d5b0b4bb14660b2a33c9d02cd8ab14d860b9191fcd398acca9254
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of a Shiga toxin-Converting Bacteriophage, Escherichia phage Lys12581Vzw, Induced from an Outbreak Shiga Toxin-Producing Escherichia coli Zhang,Y., Liao,Y.-T., Salvador,A., Sun,X. and Wu,V.C. — — GenBank