Protein

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Genbank accession
QZI92235.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLVLDPIQSGYNLSKINDNFQRIEDAWDEKLDRVNSGSFYNQMDQTLDMNSNEIINVKVGDTDDSLVNKGYVDQQDELRVLKAGDSMSGQLNTIDPVQPSNATNKRYVDGMIATIDGVEGIVPLVSPRQQGDGVTTVFPTIVTSQHPTQSYSVNLDGVTQRPQTDFTADTNGNVVFAEAPEVGVDIDITVFEPVNLQEAADLSQVTATGSTTPRTLADRFAGTANVVDFGAVGDGVADDTSAINLASASGKSVVFPKGRYRCTGKLTTSVSWEFLDGASIVIAEPVANMIEIVPEYTKTILGQGDVVIGDFVKYANKLSNLDDYPNHFMVVDSTQLDFNRNRASMQTYTKNSVTLLGENGVLAYPLTTTFNSISRIELSPTNIKRAIFKNLTVELDGAPTTPENMISVTRNCVDFHNTRYVDKTTNSGQIDLQSFVSISYAFDVTFDKITCDALSEGRLDFNYTILTWKSAKIRIKELRSFDGWAQLDGNHTRDVVVRDSTIDRIGGHYAYWDCTFDNITANQSRCIDVSGGGRLDVRNLNIRVNPDFLSGNELYAVAIRGDYAAEWDGDVLVDGVTVDARSIKGELTSETIFNIFSSFADSSSAGFNYGRPTTVAKTVTVRAVRFYCSEDSGAKWVLRACALGYVGAPVSDAQYTESVTVEDVAIVTKDTSFYHQIRALDWFGDVKPATIAQTTSINIKGVNNNDPAFAGQSPSSGLIDQVPTLSILNQDRNSIDVAVSDCNWLKIHSNGHPASPTKIDVVNSRLYYVGGDFDNRMTFNGCNWADTRFEGSWKGTVNSGWFEDYEKSGGGFGNIGFPNNIETNLSGVANVLLGANTTMTTSVHDSYTIYEGTTDGTYWQDTVRPIPNPTFRSGANNPTGVVTPLYLGEEYLDTSPGQFNFYKATGLAISNWKQITA
Physico‐chemical
properties
protein length:918 AA
molecular weight: 100263,95630 Da
isoelectric point:4,57585
aromaticity:0,09368
hydropathy:-0,27364

Domains

Domains [InterPro]
DC_2003
STR
1–546
DC_2003
IPR011050
STR
222–544
IPR011050
IPR012334
STR
225–599
IPR012334
IPR024535
ENZ
226–270
IPR024535 DC_1090
QZI92235.1
1 918
Architecture
STR
RBD
STR 1-599 | RBD 600-917 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI92235.1
1 918
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9932
Central domain 242 835 595 0,9674
C-terminal 836 918 82 0,9053
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-835
C-terminal
836-918

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS32B.1
[NCBI] 		2859359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI92235.1 [NCBI]
Genbank nucleotide accession
MW824407.1 [NCBI]
CDS location
range 45053 -> 47809
strand -
CDS
ATGCCATTAGTATTAGATCCGATTCAATCGGGTTATAACTTGTCAAAGATAAATGACAACTTCCAGCGTATTGAAGATGCGTGGGATGAGAAATTAGATAGAGTGAACTCTGGTAGTTTTTACAACCAGATGGATCAAACGTTAGATATGAACTCTAACGAAATTATTAATGTTAAAGTAGGTGACACTGACGATAGTCTTGTTAATAAAGGTTATGTAGACCAACAAGATGAGTTACGCGTACTGAAAGCTGGTGACAGCATGTCAGGTCAATTAAATACTATTGATCCTGTACAGCCGAGTAACGCAACTAACAAACGCTATGTGGATGGCATGATTGCTACTATTGATGGCGTTGAGGGTATTGTGCCTCTTGTATCTCCGCGTCAACAAGGCGATGGTGTAACAACTGTATTTCCTACTATCGTAACAAGTCAACACCCTACACAGTCTTATTCAGTGAATCTAGACGGTGTTACTCAGCGTCCTCAAACAGATTTCACTGCTGACACTAACGGTAATGTTGTATTCGCTGAAGCTCCTGAAGTAGGCGTGGATATTGACATCACTGTGTTCGAACCTGTTAACCTTCAAGAAGCAGCTGACCTGTCCCAAGTGACAGCTACAGGTTCTACTACTCCGCGTACGCTAGCTGATCGTTTTGCTGGCACAGCTAATGTAGTAGATTTTGGAGCGGTGGGTGATGGAGTCGCTGATGATACTTCAGCAATAAATCTAGCGTCTGCATCTGGGAAATCAGTAGTATTTCCTAAAGGTAGATACCGTTGTACAGGCAAGCTTACAACATCTGTTTCATGGGAATTCCTAGATGGAGCTTCGATTGTTATTGCAGAACCTGTAGCCAATATGATTGAAATCGTTCCTGAGTATACCAAGACAATTTTAGGGCAAGGTGATGTGGTAATCGGAGACTTTGTTAAGTATGCTAACAAGCTTTCTAACCTAGATGACTATCCTAACCATTTTATGGTTGTAGACTCAACGCAGTTAGATTTCAACAGAAACCGTGCAAGTATGCAGACTTATACAAAAAACTCTGTAACTCTTTTAGGTGAAAACGGTGTATTGGCATACCCTCTTACAACAACTTTTAATTCTATTTCAAGAATCGAATTATCACCTACAAATATAAAAAGAGCCATCTTTAAAAACTTGACTGTAGAGTTGGACGGTGCCCCAACCACCCCTGAGAATATGATCTCGGTAACACGTAACTGCGTAGACTTCCACAATACGCGATACGTAGACAAAACTACTAACTCAGGTCAAATAGATTTACAGTCATTCGTTTCAATATCTTATGCATTCGATGTCACTTTTGATAAGATAACGTGCGACGCTTTATCAGAAGGAAGGTTGGATTTTAACTATACGATATTGACATGGAAATCAGCTAAGATACGTATAAAGGAGTTACGTTCTTTTGACGGCTGGGCTCAGCTAGACGGCAACCATACTCGTGATGTTGTAGTCAGAGACTCCACTATTGACAGGATAGGCGGACATTATGCGTATTGGGATTGCACCTTCGACAATATAACAGCTAACCAGTCCAGATGTATTGATGTCAGCGGAGGAGGTCGACTAGATGTTCGAAACTTGAATATCAGAGTGAACCCTGATTTCCTTTCAGGGAATGAACTCTATGCTGTAGCTATACGCGGTGACTATGCAGCAGAGTGGGATGGAGATGTACTGGTTGATGGTGTAACAGTAGACGCTCGTTCCATCAAAGGCGAGTTGACTTCAGAGACGATCTTCAATATCTTTTCCAGTTTTGCAGATTCTTCAAGTGCAGGTTTTAACTATGGAAGACCCACTACAGTAGCTAAGACAGTTACAGTACGAGCGGTACGTTTCTACTGTAGCGAAGATTCCGGTGCAAAATGGGTACTTCGCGCCTGTGCGCTAGGCTACGTAGGAGCTCCTGTTTCTGACGCGCAGTATACTGAAAGTGTGACTGTTGAAGACGTAGCTATCGTTACAAAGGATACATCCTTCTACCATCAGATCAGGGCTCTGGATTGGTTTGGCGATGTTAAGCCAGCTACAATTGCACAGACTACCAGTATTAACATCAAAGGTGTTAATAATAACGACCCTGCATTTGCAGGGCAATCTCCTAGTTCTGGATTGATTGACCAAGTACCGACCCTATCTATTCTTAACCAAGATCGTAACAGTATAGATGTGGCAGTGTCCGACTGCAATTGGCTGAAGATCCACTCTAATGGGCATCCTGCTTCACCCACTAAGATAGATGTTGTAAATTCAAGACTGTATTACGTAGGAGGGGATTTTGACAACAGGATGACTTTCAATGGCTGCAACTGGGCAGATACTCGATTTGAAGGTTCTTGGAAAGGTACTGTTAATAGCGGATGGTTCGAAGACTATGAAAAATCTGGAGGAGGTTTCGGCAATATTGGTTTCCCTAACAATATCGAAACGAACCTATCAGGGGTAGCCAATGTACTGCTTGGGGCAAACACCACTATGACTACCAGCGTACACGATTCATATACTATATATGAGGGCACAACCGATGGGACTTATTGGCAGGACACTGTTCGCCCAATTCCTAATCCAACTTTTAGATCAGGAGCTAATAACCCTACAGGGGTAGTGACTCCACTGTACCTTGGGGAAGAGTACCTAGATACTTCCCCTGGTCAGTTTAACTTCTATAAAGCTACAGGTCTCGCAATATCCAATTGGAAACAGATTACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06acff41e16e4d06744388d20d592eeda21d853f5d236c639bac2a910c01394c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2928
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50