Protein

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Genbank accession
XLQ29411.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGDSDALGQAPYIHLINRDESEQYYAVFTGSDIRVFDLAGNEKQVRYPNGSDYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDTTSVNLPNYNPKQDGLINVRGGQYGRELIVHINGKDVAKYKIPDGSQPAHVNNTDAQWLAEELAKKMRTNLSGWDVAVGQGFIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASRSADQYYVKYDAERKVWAETLGWNTDSQVLWETMPHALVRASDGNFDFKWLEWSPKSCGDTDTNPWPSFVDSSINDVFFFRNRLGFLSGENIVLSRTAKYFNFYPASVANLSDDDPIDVAVSTNRIAVLKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSINSDMYVILRNEFNTFLAKVSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSVHLPTIYDGANFGRGKITVLEPDGKITVFEQPSDGWQSDPWLRLDGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGAFTIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKYNTVSVLSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89312,69870 Da
isoelectric point:5,55535
aromaticity:0,11950
hydropathy:-0,40906

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
XLQ29411.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ29411.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9938
Central domain 141 348 209 0,2618
C-terminal 349 795 446 0,2014
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-348
C-terminal
349-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KKE5P
[NCBI] 		3366622 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ29411.1 [NCBI]
Genbank nucleotide accession
PQ356293 [NCBI]
CDS location
range 30248 -> 32635
strand -
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCAATGGTTTTCCTTAAGACACTTGGAGACAGTGATGCGTTAGGCCAAGCTCCGTACATCCACCTGATTAATCGTGATGAAAGCGAGCAGTATTATGCTGTGTTCACTGGTAGTGATATCCGAGTGTTCGACCTCGCTGGGAACGAGAAGCAAGTTAGGTATCCTAACGGTTCCGACTACATCAAGACCGCTAACCCACGTAGCGACCTGCGAATGGTTACTGTAGCAGATTATACGTTCATCGTTAACCGCAACGTTGTTGTACAGAAGGACACAACGTCTGTCAACTTACCGAATTACAACCCTAAGCAAGACGGGTTGATTAACGTTCGTGGTGGTCAGTATGGTAGGGAACTAATTGTACACATTAACGGTAAAGATGTTGCGAAGTATAAAATCCCAGATGGTAGTCAACCGGCACACGTGAACAATACGGATGCCCAGTGGTTAGCCGAAGAGTTAGCCAAGAAGATGCGAACTAACTTGTCTGGATGGGATGTAGCTGTGGGGCAAGGGTTCATACACGTTACCGCACCTAGTGGTCAACAGATTGACTCCTTCACGACTAAAGATGGATACGCAGACCAGTTGATTAACCCTGTGACCCACTACGCTCAGTCGTTCTCTAAGTTGCCACCTAATGCCCCTAACGGCTACATGGTGAAAATCGTAGGGGACGCCTCTAGGTCTGCCGACCAGTATTATGTTAAGTATGACGCTGAGAGGAAAGTTTGGGCTGAGACTTTGGGTTGGAACACTGATAGCCAAGTCCTATGGGAAACTATGCCACACGCTCTTGTGCGAGCCTCTGACGGTAATTTCGACTTCAAGTGGCTTGAGTGGTCTCCTAAGTCTTGTGGTGACACTGACACCAACCCTTGGCCTTCTTTTGTTGACTCAAGTATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGATTCCTTAGTGGGGAGAACATCGTATTGAGTCGTACAGCCAAATACTTCAACTTCTACCCTGCGTCCGTTGCGAACCTTAGTGATGACGACCCTATAGACGTAGCTGTGAGTACCAACCGAATAGCAGTCCTCAAGTACGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTCCTGACCGCTTCTGGTACTCTCACGTCGAAGTCGGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTATGGTATCGGGCGTAATGTCTACTTTGCTAGTCCGAGGTCCAGCTACACGTCCATCCACAGATACTACGCTGTGCAGGATGTCAGTTCCGTTAAGAACGCGGAGGACATCACAGCACACGTTCCTAACTACATCCCAAATGGTGTGTTTAGTATTTGCGGTAGTGGTACGGAAAACTTCTGTTCTGTACTATCTCACGGGGACCCTAGTAAAATCTTCATGTACAAATTCCTGTATCTGAACGAAGAGTTAAGACAACAGTCGTGGTCTCATTGGGACTTTGGGGAAAACGTGCAGGTTCTAGCTTGCCAGAGTATCAACTCGGACATGTATGTGATTCTGCGCAATGAGTTCAATACGTTCCTAGCTAAAGTCTCTTTCACTAAGAACGCCATTGACTTACAAGGCGAACCGTATCGTGCCTTTATGGACATGAAGATTCGCTATACGATTCCCAGTGGAACATACAACGATGACACCTTCACTACCTCGGTTCACCTACCAACAATCTATGATGGTGCAAACTTCGGGAGGGGTAAAATCACTGTACTGGAGCCTGACGGCAAGATAACTGTATTTGAGCAACCTTCGGATGGGTGGCAAAGCGACCCTTGGTTGAGACTCGACGGTAACTTGGAGGGTCGAATGGTGTACATTGGATTCAACATCAACTTCGTCTACGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCTACCTCCACGGAAGACATTGGGCGCTTGCAGTTACGCCGAGCGTGGGTGAACTATGAGAACTCTGGGGCGTTCACTATTTATGTTGAGAACCAATCGTCCAACTGGAAGTACACAATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACCGGACAATACCGATTCCCTGTGGTTGGTAACGCCAAGTACAATACAGTGTCCGTCTTGTCTGATGAGACTACCCCGCTGAACATCATTGGATGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b797817eed110820a20446f92b0a36cfd30f1739cd933a71e4e341806b178273
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Direct submission of Escherichia Phage Genome Khan,R., Singh,S. and Kondabagil,K. 2024-01-17 — GenBank