Protein

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Genbank accession
QIG60650.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKMTVTKALTEIKKLDKQIAKLVQSGQFILTATRGHVPGFTTTEDASKAVKANMDKVRALMKRRALIKAKVTASNAATKVTIGGVEMTVAEAIERKASIEMDETLLQVLKQQFNQVTNKQVRHEQMVQSQIDSKVEQVFGNVKKIDANDGTYKAIKEQVEQANKFDIVDPNKLADEIEKLEESIDDFKANVDVELSVANATTEIEVE
Physico‐chemical
properties
protein length:207 AA
molecular weight: 22978,10820 Da
isoelectric point:6,22906
aromaticity:0,03382
hydropathy:-0,39517

Domains

Domains [InterPro]
DC_0027
STR
1–207
DC_0027
Coil
Unmapped
5–25
Coil
QIG60650.1
1 207
Architecture
STR
STR 1-207
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPT02
[NCBI] 		2698726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG60650.1 [NCBI]
Genbank nucleotide accession
MN954399.1 [NCBI]
CDS location
range 40142 -> 40765
strand -
CDS
ATGAAAATGACAGTAACTAAAGCTCTTACTGAAATCAAAAAACTTGACAAACAAATCGCTAAGCTAGTTCAAAGCGGTCAGTTTATCCTAACAGCAACCCGTGGACATGTCCCAGGCTTCACAACTACTGAAGATGCTAGCAAAGCTGTTAAAGCTAACATGGATAAAGTACGCGCTCTTATGAAACGTCGTGCTCTTATCAAAGCTAAAGTTACTGCGTCTAACGCTGCAACTAAAGTTACAATCGGCGGAGTCGAAATGACTGTTGCAGAAGCAATTGAGCGTAAAGCCTCAATTGAGATGGACGAGACACTTCTTCAAGTCCTAAAACAACAGTTTAATCAAGTTACTAACAAACAAGTACGCCATGAGCAAATGGTTCAATCTCAGATTGATTCTAAAGTCGAACAAGTATTCGGTAACGTGAAGAAAATCGACGCTAATGATGGTACTTACAAGGCTATCAAAGAACAGGTTGAACAAGCCAACAAGTTCGATATTGTTGACCCTAATAAACTTGCTGATGAAATCGAGAAGCTTGAAGAGTCTATCGACGACTTCAAAGCTAACGTTGACGTAGAGCTATCCGTAGCTAACGCGACTACTGAAATCGAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d20cd60465fcde09609296bd6ca5da935b335051c1a832b0c923fc27769e5716
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio parahaemolyticus Bacteriophage VpT02 Kim,B.S. and Kim,M. 2012-06-15 — GenBank