Protein

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Genbank accession
YP_009833797.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MDSYLNSFRRVVCARNFNSVYFKGTGTGNAGEKISFFECLFSDTSSSNIVLDIFAFELTFDNCSFDYQKGDVFFLGKSTTHGWVKITNSHIEGFDGYLINQPDKWTGTGQKFYFVNTQVWGVYATIPYSPPRKLFDAELGAFYVSFQDSPVNFRNKGTKDYGTLTGFGKTNDSSSVTGQFTVNSSRTDPCYLISYNLADNRRYRFTGTEGVVLPNPEPSTGISYITRNGAVEVTYGKIGADGLQSVVINSSDVGAEVDFVFPERVPVGPRDTFNSMISVKQGSATGDVKVFGIARCFTDPTMTGKKNAADDNVVITTNYPVLGTTADRNFLLSEALGEVGTNVTRNDFVATPPLTSTLWNAVKSASIGLRITGFTGSIEIKLPVYWKVK
Physico‐chemical
properties
protein length:389 AA
molecular weight: 42677,28870 Da
isoelectric point:6,19985
aromaticity:0,13111
hydropathy:-0,18766

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009833797.1
1 389
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0038
Central domain 11 206 197 0,9394
C-terminal 207 389 182 0,9062
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-206
C-terminal
207-389

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_ 2050HW
[NCBI] 		2024252 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus mv2050HW >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009833797.1 [NCBI]
Genbank nucleotide accession
NC_048668.1 [NCBI]
CDS location
range 110512 -> 111681
strand +
CDS
GTGGATAGTTACCTGAACTCTTTCCGTAGGGTAGTCTGTGCCAGGAATTTTAACTCGGTTTACTTTAAAGGTACCGGAACTGGTAACGCCGGAGAAAAAATTTCATTCTTCGAATGTCTATTCAGCGACACCTCTTCATCCAACATTGTCCTTGATATTTTTGCGTTTGAGTTAACCTTCGATAATTGTAGTTTTGACTATCAGAAAGGCGATGTATTCTTCTTAGGTAAGAGTACAACTCACGGATGGGTTAAAATTACCAATTCCCATATCGAAGGATTCGATGGTTATCTTATCAACCAACCGGATAAGTGGACGGGTACCGGACAGAAGTTCTACTTCGTCAATACCCAGGTTTGGGGCGTATACGCCACAATTCCATATAGTCCACCACGTAAACTCTTCGACGCAGAATTGGGAGCATTCTACGTTAGCTTCCAGGATTCCCCGGTAAACTTCCGGAATAAGGGTACTAAGGACTACGGGACATTAACTGGATTTGGTAAAACGAATGACAGTAGTTCAGTTACTGGCCAGTTCACTGTGAATAGCTCCAGAACCGATCCATGTTACTTGATAAGCTATAACCTTGCTGATAACCGTAGGTATCGTTTTACCGGTACAGAAGGCGTAGTATTACCTAACCCGGAACCTAGCACTGGGATTTCCTACATTACCCGCAACGGTGCAGTAGAAGTCACCTATGGCAAAATTGGGGCAGACGGGCTTCAGAGCGTTGTTATCAACTCTAGTGATGTCGGTGCTGAGGTAGACTTTGTCTTCCCTGAAAGGGTCCCGGTCGGTCCACGAGATACCTTTAATAGCATGATATCAGTTAAGCAAGGTAGTGCGACTGGTGATGTGAAAGTGTTCGGTATTGCGCGCTGCTTTACAGACCCAACTATGACAGGTAAGAAGAACGCTGCTGACGATAACGTAGTGATCACCACTAACTATCCAGTACTAGGTACAACCGCCGATCGTAACTTCCTCCTTTCAGAAGCACTAGGTGAAGTAGGTACTAACGTGACCCGTAACGATTTCGTCGCAACCCCTCCATTAACATCAACGTTATGGAACGCTGTTAAGAGCGCCAGTATTGGTCTTCGTATTACTGGCTTCACCGGTTCAATCGAGATCAAACTACCAGTGTACTGGAAGGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce70f5a3ec5105b8f6a365fb9d4d176d714a1010d0b85526ea791a3979a594bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50