Protein

View in Explore
Genbank accession
AUR94047.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MTLPELLATQTTITQLNPAQEAKVSMVLAVDNTNETTGQLETLKLSVEQLLALVRLQGNEAPTGTPLPWLTPTIPAGYISENAEFDPLQFPELAQVFPDNRTPSIAGRVLKGTTSFAATGSHEADQGKAHSHQATFAGAAVANHSHTMAHTHTQQRLATFESTQSINDASWGQTTVPATGWSRSRQVSGSSGSPIGMRFNNANVPTGGASAGYTGGAGAHTPAGSVTVNNDGGSEVRVKSILCRYMFRAR
Physico‐chemical
properties
protein length:250 AA
molecular weight: 26295,90850 Da
isoelectric point:6,43670
aromaticity:0,05600
hydropathy:-0,31240

Domains

Domains [InterPro]
DC_0310
STR
4–250
DC_0310
SSF88874
STR
56–249
SSF88874
IPR037053
ATT
60–111
IPR037053
AUR94047.1
1 250
Architecture
STR
ATT
STR
STR 4-59 | ATT 60-111 | STR 112-250
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.190.O._10N.286.51.F12
[NCBI] 		1881345 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR94047.1 [NCBI]
Genbank nucleotide accession
MG592560.1 [NCBI]
CDS location
range 14478 -> 15230
strand +
CDS
ATGACGTTACCAGAGTTACTAGCAACACAAACAACAATCACGCAACTCAACCCAGCACAAGAAGCGAAAGTATCTATGGTGCTAGCGGTGGACAACACAAACGAAACGACAGGTCAGTTGGAAACGCTAAAGCTATCAGTTGAGCAACTACTAGCCCTAGTCCGACTACAAGGAAATGAAGCACCAACAGGCACACCTCTCCCTTGGCTAACCCCTACCATACCAGCGGGGTATATTAGCGAAAACGCAGAGTTTGACCCACTCCAGTTCCCAGAGTTAGCACAGGTTTTCCCAGACAATAGAACACCCAGCATAGCGGGGCGAGTCTTGAAGGGTACGACGTCATTTGCAGCAACAGGGAGTCATGAGGCAGATCAGGGCAAGGCGCATAGCCATCAGGCGACATTTGCGGGCGCTGCCGTAGCCAATCACAGCCACACGATGGCGCACACCCACACACAGCAGAGGTTGGCGACATTTGAATCAACTCAAAGCATAAATGATGCAAGCTGGGGACAAACAACCGTACCCGCAACAGGGTGGTCTAGAAGCCGTCAGGTTTCGGGTTCATCTGGATCGCCTATTGGGATGAGGTTTAATAACGCAAACGTACCGACGGGCGGAGCCAGCGCAGGCTACACGGGAGGGGCGGGAGCGCATACACCAGCGGGAAGCGTAACCGTAAACAACGATGGAGGCTCAGAGGTTCGAGTAAAGTCCATATTGTGTCGTTATATGTTTCGTGCGCGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b09dca5fcde5b7a61dfb02c50664a0dc4faee04fe44073af9d40f73467c9678f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7166
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank