Protein

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Genbank accession
AUR92937.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAGGFESKRVGGSFPDKEEQQITGAVNSVNGHTGDVTLTASDVGVYSRGESDNNYEGKRSTGVIGAADDPTKKPEGDYYVNEKFIGAPVIASNQYIGVMRIDLDFDGSDNGGLIEYITADTIFYKPKFAGGWASDWIEAPKAQAAMARTLSALGAEETTLEAKVAELESKVTELEKHSSAPKSGKFDPLTVALTAGYADNWQGAIHVSTHKTGSPITVTKVSDEPHNAVVMMAPEAASHVTGITIDGGLPAKWESHGVTIDGKQYTAFISPYKLTKHPLSIGIVWG
Physico‐chemical
properties
protein length:286 AA
molecular weight: 30324,41220 Da
isoelectric point:5,10269
aromaticity:0,08042
hydropathy:-0,31469

Domains

Domains [InterPro]
DC_0845
STR
7–286
DC_0845
Coil
Unmapped
150–177
Coil
AUR92937.1
1 286
Architecture
STR
STR 7-286
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.179.O._10N.286.45.F12
[NCBI] 		1881432 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92937.1 [NCBI]
Genbank nucleotide accession
MG592546.1 [NCBI]
CDS location
range 18243 -> 19103
strand +
CDS
ATGGCTGGTGGTTTCGAAAGTAAAAGGGTGGGCGGCTCATTTCCAGATAAAGAAGAGCAGCAAATAACAGGCGCTGTAAATTCTGTGAATGGTCACACTGGTGACGTAACGCTAACGGCTTCGGATGTTGGCGTATACTCACGCGGCGAGTCTGATAATAACTATGAGGGTAAGCGCTCAACTGGTGTAATTGGCGCGGCGGACGACCCAACAAAAAAGCCAGAGGGTGACTATTACGTAAATGAAAAATTTATAGGTGCGCCAGTAATTGCAAGCAATCAATACATTGGAGTGATGCGAATTGATCTTGATTTTGATGGCTCGGACAATGGCGGTCTAATCGAGTACATAACGGCGGATACTATTTTCTACAAACCAAAGTTTGCTGGTGGGTGGGCTAGTGACTGGATAGAGGCGCCAAAGGCACAAGCAGCAATGGCAAGAACATTATCAGCACTGGGCGCAGAAGAAACAACGCTAGAGGCAAAGGTGGCAGAGTTAGAAAGCAAAGTAACCGAATTAGAAAAGCACAGCTCAGCACCAAAGTCAGGCAAGTTTGACCCGTTAACAGTGGCATTAACGGCTGGGTATGCGGATAACTGGCAAGGTGCAATACACGTAAGCACGCACAAAACAGGCTCGCCAATTACCGTCACAAAGGTAAGTGATGAGCCACACAACGCGGTGGTAATGATGGCGCCAGAAGCGGCAAGCCATGTAACAGGAATAACCATAGATGGAGGTTTACCAGCTAAATGGGAAAGTCACGGCGTCACCATTGATGGAAAGCAATACACGGCGTTTATATCGCCGTACAAACTAACTAAACATCCTTTAAGCATTGGCATAGTCTGGGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
978e911cf0cfc03cf9cd8f6144cb713ce28a2bbef68f5344e190d4757bb18852
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank