Protein

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Genbank accession
QBP06007.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPFVTPSGHEFSFYDTPENERLVVRHTSGSHIEFKADGSVFIKAVKDIHTHSSVLSAQSNSNGAEATTQRIDTDLNLEIGGKLRIRCDELDLEVGSTGRVYAGTDFMIQGNNVVTKATESISLEGTKSIYVDTKEMRERVVSRQTEAGTMEDGSQGGLNVMNVYGNTIIQNNDENGGITIASKGYLNLVAGAERVDLIGQFTDTPSSEAKGTFTTIVKQSSGSMDVSTMPGDYVFESDAGASYTYAKSSGGSSESQQDGLKIEVQQGDETHEVTIGDKTHNVTAGRLEETVGQNRQRTVGGNELVNISGTQTVNAEKIFLN
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34497,43710 Da
isoelectric point:4,77507
aromaticity:0,05607
hydropathy:-0,49065

Domains

Domains [InterPro]
G3DSA:3.10.450.190
STR
3–47
G3DSA:3.10.450.190
QBP06007.1
1 321
Architecture
STR
STR 3-47 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBP06007.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,3564
Central domain 74 272 200 0,2872
C-terminal 273 321 48 0,9755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B68
[NCBI] 		2545437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP06007.1 [NCBI]
Genbank nucleotide accession
MK016664 [NCBI]
CDS location
range 24430 -> 25395
strand +
CDS
ATGCCATTCGTGACCCCCTCCGGTCACGAGTTCTCTTTCTATGACACCCCAGAGAATGAGCGTCTGGTAGTTCGTCATACCAGCGGATCTCACATTGAGTTCAAGGCAGACGGTAGCGTCTTCATCAAAGCGGTGAAGGATATCCACACTCACTCCAGTGTGTTGTCTGCTCAGTCTAACTCTAACGGCGCTGAGGCAACCACCCAGCGTATTGATACCGACCTCAATCTGGAGATCGGTGGTAAGTTGCGCATCCGTTGTGATGAGTTGGATCTGGAAGTTGGTTCGACCGGTCGTGTCTATGCCGGTACTGACTTTATGATTCAGGGTAACAACGTCGTCACCAAGGCGACCGAGTCTATCTCCCTGGAGGGAACCAAGTCGATCTACGTTGACACCAAAGAAATGAGGGAGCGCGTCGTCTCCCGTCAGACCGAAGCAGGAACCATGGAAGATGGATCCCAGGGTGGTCTGAACGTAATGAATGTATATGGTAACACCATCATTCAGAACAACGACGAGAACGGTGGTATCACCATTGCGTCCAAGGGTTACCTGAACCTAGTAGCAGGCGCCGAGCGCGTTGACCTGATTGGTCAGTTCACCGATACCCCCTCCTCTGAGGCGAAGGGTACCTTCACCACTATCGTCAAGCAGTCCAGTGGTTCTATGGACGTCTCCACCATGCCCGGAGACTACGTCTTTGAGTCTGACGCTGGTGCCTCCTATACCTATGCTAAGTCCTCTGGTGGATCCTCTGAGTCGCAGCAGGACGGTCTGAAGATTGAGGTTCAGCAAGGTGACGAGACCCACGAGGTTACCATTGGTGACAAGACCCACAACGTTACTGCTGGTAGGTTGGAAGAGACCGTTGGTCAGAACCGTCAGCGTACTGTTGGTGGAAACGAACTTGTGAACATCAGCGGTACCCAGACCGTTAACGCAGAGAAGATCTTCCTGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
88d36389fdc0d28c90ce7fc713c59636a8f49428010edf877a5ef7f0be80ddd0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-LB68 from the Huang Bohai Liu,X. 2020-10 — GenBank