Protein

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Genbank accession
AUR90610.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDCSSYPTKSTAETFKLDAETVNEVVTSSDDRTQPASDGLTKKTLTGIENDASTQLADIQQRADEQYSDISNQYVLRNKGDYATDPLLEFYYEFTDFNGLIYFPIVSPYQVDSATYPDPSNDPNLRLGQATDDSLITATGSTTPRRLDDRFADVVSVKDFGATGDGVTDDTAALQRAINHGGSVTIPPGTYVITDSLYFIGGLSDKMFTGAGRGATIFKAVGMAGKSMFTHGSENSYIRITMSDFTMNGDADTCINFSLASPYQVYRSSFHRITCNSISGSAIIMTEEFSTDFQQVIVNSQGGHGFELEGGNTTTLMNCYAQNISSPSHAGYRIKGAALMLSCNGVDSGYIWGWFGDNGTIKAQHNMKLINCNVEDFKDRGLIFEYTGSSTIDGIVFTPPAVATSPTYNHAIEMIGASVDTCLDIRNVRINSKGSTRASPSEVVTESAFNLIVKGRTKDLSTMYSTNFSLLYNVPQWNSEPLKYATNALTTDVLAADEITVERVYGWVSKRTADVPDLSVDIDCGLALDNHVFAMSAATRINRGLSGTYGQKITFLWNDDTTYIKHLYGSAGQFVCKDGVDLHGTVGDVAVFVYSYSNRWVQQ
Physico‐chemical
properties
protein length:604 AA
molecular weight: 65835,31500 Da
isoelectric point:4,69680
aromaticity:0,10099
hydropathy:-0,25066

Domains

Domains [InterPro]
DC_0489
STR
1–600
DC_0489
IPR012334
STR
134–452
IPR012334
IPR011050
STR
153–399
IPR011050
IPR024535
ENZ
156–324
IPR024535
AUR90610.1
1 604
Architecture
STR
STR 1-600 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR90610.1
1 604
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,9822
Central domain 171 490 321 0,9679
C-terminal 491 604 113 0,9336
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-490
C-terminal
491-604

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.148.O._10N.286.54.A10
[NCBI] 		1881207 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR90610.1 [NCBI]
Genbank nucleotide accession
MG592517.1 [NCBI]
CDS location
range 16778 -> 18592
strand +
CDS
ATGACTGATTGTAGTTCATATCCAACCAAATCAACGGCGGAAACATTTAAGTTAGATGCTGAAACAGTAAACGAGGTTGTTACTTCTAGTGATGATCGCACACAACCAGCGAGTGACGGATTAACTAAAAAAACGCTTACTGGGATAGAGAACGATGCATCAACCCAACTTGCAGATATTCAACAGCGAGCGGATGAGCAATACTCTGACATCAGCAATCAGTATGTTTTACGCAACAAAGGCGATTACGCAACAGACCCATTGCTAGAATTTTACTATGAGTTTACTGATTTCAATGGGTTGATTTACTTTCCTATCGTTTCGCCATATCAAGTTGATAGTGCAACATATCCGGACCCATCAAATGACCCGAATTTAAGGCTAGGACAGGCAACAGATGATAGCTTAATCACAGCAACGGGAAGCACTACGCCAAGACGACTGGATGATCGCTTTGCTGATGTCGTTAGCGTTAAGGACTTTGGAGCCACTGGAGACGGTGTCACTGATGACACAGCAGCACTGCAAAGAGCGATAAATCATGGCGGCAGTGTAACAATACCGCCAGGTACATATGTAATTACAGATAGCCTATACTTCATCGGTGGGCTTTCGGATAAGATGTTTACCGGAGCGGGTAGGGGAGCGACCATATTTAAAGCCGTTGGAATGGCTGGAAAGTCCATGTTTACACATGGAAGTGAGAATAGTTACATAAGAATAACAATGAGTGATTTCACCATGAATGGTGATGCAGATACGTGTATAAACTTCTCGCTGGCCAGTCCTTACCAAGTGTACAGATCATCATTTCACAGAATTACATGCAACTCTATTTCTGGTAGTGCGATTATTATGACTGAGGAGTTTTCCACAGACTTTCAGCAAGTAATAGTCAACTCACAGGGTGGTCATGGATTTGAATTAGAAGGTGGCAACACCACAACCCTTATGAACTGTTACGCTCAAAACATATCAAGCCCATCTCATGCAGGTTACAGAATCAAAGGTGCTGCATTAATGTTATCGTGCAACGGGGTTGACTCTGGTTACATATGGGGCTGGTTTGGTGATAATGGCACTATCAAAGCACAGCATAATATGAAACTAATAAATTGTAATGTTGAGGATTTCAAAGACAGAGGGCTTATATTTGAATACACAGGCTCATCTACTATAGATGGAATAGTGTTCACTCCCCCCGCCGTTGCAACATCGCCAACCTACAATCATGCAATAGAGATGATAGGCGCATCGGTTGATACATGCTTAGACATACGAAATGTTCGCATTAACTCTAAAGGGTCAACAAGAGCTTCCCCATCTGAGGTTGTGACAGAATCTGCTTTTAATTTAATAGTTAAGGGTAGAACTAAAGATCTTTCCACTATGTATTCAACAAACTTTAGCCTACTTTATAATGTACCGCAATGGAATTCAGAACCTTTAAAGTATGCAACAAACGCACTAACCACGGACGTGCTTGCAGCGGACGAAATAACAGTAGAGCGTGTTTATGGGTGGGTATCAAAGCGCACAGCTGATGTCCCTGACTTATCTGTTGATATTGATTGCGGGCTTGCATTAGATAATCATGTGTTCGCTATGTCAGCAGCGACAAGAATAAATAGGGGTTTAAGTGGGACTTACGGGCAAAAAATAACATTCTTATGGAATGATGACACAACATATATAAAGCATTTGTATGGCTCTGCGGGGCAGTTTGTTTGCAAAGATGGCGTTGATTTGCATGGAACCGTTGGAGATGTAGCTGTATTTGTTTACTCATATTCAAACAGATGGGTTCAGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f2b492048eedf3ef317de5da95abc3f14293e3907c8d4aea6a245ade689f729
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank