Protein

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Genbank accession
YP_009987341.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MAANTPEQHVQAVYKAEQDINSTKNTNNSASTVKGENGFCILASVYNSASDQYIQNYQAIVFDAVPNIGVKRQADVTSYPVENGANVSDHVQVKNNTFSLSGMITETPVRLMRDMLYSAGVNGTRISQAITYLDKIFDERQPIILITEHKVYENVILKGISYEYQTEYAMQFDLEFEQVRLVSYGETNAIALKTKPNKNTGVKNKKGTSPDADLDARTGKATGTEHLSDHSADGKK
Physico‐chemical
properties
protein length:236 AA
molecular weight: 26068,74850 Da
isoelectric point:5,75815
aromaticity:0,07627
hydropathy:-0,53136

Domains

Domains [InterPro]
DC_0628
STR
42–236
DC_0628
IPR048494
ATT
62–187
IPR048494
YP_009987341.1
1 236
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-187 | STR 188-236
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VEcB
[NCBI] 		2776821 Uroviricota > Caudoviricetes > Stephanstirmvirinae > Justusliebigvirus VEcB >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009987341.1 [NCBI]
Genbank nucleotide accession
NC_052663.1 [NCBI]
CDS location
range 70260 -> 70970
strand +
CDS
ATGGCAGCAAACACTCCAGAACAACACGTTCAAGCGGTTTATAAAGCGGAACAAGATATAAATTCTACAAAAAACACAAATAACTCTGCCTCTACTGTGAAAGGGGAGAATGGTTTTTGTATTTTAGCAAGTGTTTACAATAGTGCAAGTGATCAATATATTCAAAACTACCAAGCTATAGTTTTTGATGCTGTTCCAAATATCGGTGTAAAACGTCAAGCAGATGTAACTAGTTATCCTGTAGAAAATGGAGCTAATGTATCGGATCACGTTCAAGTTAAAAATAATACTTTCTCTTTATCAGGAATGATTACAGAGACACCTGTAAGATTAATGCGAGATATGCTATATAGTGCTGGTGTTAACGGTACTCGTATCAGTCAAGCAATTACTTACTTAGATAAAATATTTGATGAAAGACAGCCTATCATTTTAATAACAGAACATAAGGTGTATGAGAATGTTATTTTGAAAGGCATATCATATGAATATCAAACAGAATATGCAATGCAATTTGACTTGGAATTTGAACAAGTAAGATTAGTTTCTTACGGGGAAACAAATGCTATTGCACTTAAGACAAAACCAAATAAGAATACAGGTGTTAAAAACAAGAAAGGTACTAGTCCAGATGCTGATTTGGATGCAAGAACAGGGAAAGCAACTGGTACAGAACATCTTAGTGATCACAGTGCAGATGGTAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b66ccc8eedb2dbaf5a1538ee6d01e74c4f6570e6c494b311daacbd6e0a7ca26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Escherichia coli phage VEcB Denisenko,E., Kislichkina,A., Verevkin,V., Krasilnikova,V. and Volozhantsev,N. 2025-01-27 — GenBank