Protein

View in Explore
Genbank accession
YP_009808730.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKTFDFESLQNLANQVKADSQSAGASATAAAASESKAKTSETNAKASETAAKTSETNAKSSETKAKTSETNAKASETAAKTSETNAKASETAAKTSETNAKSSENKAKTSETNAKASETAAKTSETNANASETAAKTSETNAKASETAANSAKTDAQTAKGQTQNLRDQVVDLVAGVQAPDKLPTSPGSSRAWMKIANVKNAGQSNCFAQFIIGGGANFGSANLPVDIFSISGRSLPDTLTSNNIDANFTQRALIAAVNSTSRLKLGVVKNTDGSFDVYLLSPYGYFPVMWLNRLNVQSNNGLITGPIIDRTGYAWITTEPTGIVYNSPSDYLLANDSTIPRTNVANTFSQPQAISVPGGNATFTLNGCTVRANNNNVLVLSTPSGSEGMSFRPNGDTSTSGQMTISGNGDVLVNGVVKSNGVDVTASQKLPLKETTATTGVGVNFIGSHTTECSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSDYTAHSNAALHFLGAGDASATNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGVMHPDLGLVRSIETLNAAVPGFNAPTNQDGRGLKLVGSPAPEINMIAPRAGLTSAPAIRAMWCDGDLSGTSRSVGATQAGSSFYIGASGHDGQKFDSMRVAISFSAVQGWGTTNTPTDISFETTAVGSTGRRSVWRIGASGSLAPSTDNSVDIGGASVRVGQVYAVRGTINTSDARLKNDVREMSNPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAMEIMESFGLEPFKYGFICYDKWDEQTVVSEYGPANEDGSENPIYKTIPAGDRYSFRLDELNMFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:971 AA
molecular weight: 102096,05330 Da
isoelectric point:5,53392
aromaticity:0,06694
hydropathy:-0,30525

Domains

Domains [InterPro]
DC_0313
STR
1–969
DC_0313
IPR036388
RBD
825–970
IPR036388
IPR030392
CHP
839–898
IPR030392
cd10144
CHP
839–961
cd10144
IPR030392
CHP
839–969
IPR030392
YP_009808730.1
1 971
Architecture
STR
STR 1-970 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009808730.1
1 971
Domain Start End Length (AA) Confidence
N-terminal 1 340 340 0,7139
Central domain 341 539 200 0,5626
C-terminal 540 971 431 0,9267
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-340
Central
341-539
C-terminal
540-971

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage NJS2
[NCBI] 		2301688 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus NJS2 > Klebsiella virus NJS2
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009808730.1 [NCBI]
Genbank nucleotide accession
NC_048043.1 [NCBI]
CDS location
range 29564 -> 32479
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGTGACTCACTTACCGTTGACGGCCTGGCGCAAGATGTTGCGGAAACCCTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGACGTTTGATTTTGAGTCGCTGCAAAATCTTGCCAACCAGGTAAAGGCGGATTCACAATCCGCAGGCGCGAGCGCTACGGCTGCGGCGGCGTCTGAAAGCAAGGCGAAGACTTCAGAGACCAATGCAAAGGCGTCAGAAACAGCCGCAAAGACTTCAGAGACCAACGCCAAATCATCTGAAACTAAGGCTAAAACCTCAGAGACTAACGCCAAAGCATCCGAAACAGCCGCGAAAACCTCGGAAACTAACGCCAAAGCATCCGAAACCGCTGCAAAAACATCGGAGACGAACGCAAAATCGTCTGAAAATAAAGCTAAAACCTCGGAGACAAATGCAAAGGCATCAGAAACCGCAGCGAAGACCTCGGAGACGAACGCAAATGCGTCAGAAACCGCAGCAAAAACTTCGGAGACCAATGCAAAAGCGTCCGAAACTGCTGCCAACTCCGCGAAGACAGACGCGCAAACTGCGAAGGGGCAGACGCAAAATCTTCGTGATCAGGTTGTAGATCTTGTGGCTGGCGTTCAAGCACCGGATAAGCTGCCAACCTCGCCAGGTAGCTCGCGGGCGTGGATGAAGATTGCCAACGTTAAGAACGCTGGACAGTCAAACTGTTTTGCGCAATTTATTATTGGTGGTGGCGCTAACTTCGGTTCGGCAAATCTCCCGGTCGATATCTTTTCGATTTCTGGTCGTAGTCTTCCTGATACGCTAACCAGTAATAATATTGACGCCAACTTTACTCAACGCGCACTGATTGCCGCAGTAAATAGCACGTCACGTTTGAAGTTGGGGGTTGTGAAAAACACTGACGGATCTTTTGATGTTTATTTGCTATCGCCTTACGGTTACTTTCCCGTTATGTGGTTAAACCGTTTGAACGTGCAATCTAATAATGGGTTGATTACCGGGCCGATCATCGATCGCACTGGTTATGCATGGATTACCACGGAGCCAACCGGGATTGTATATAATTCACCGTCTGATTATTTGCTGGCTAACGATAGCACGATCCCACGAACCAACGTGGCCAACACGTTCAGTCAGCCGCAGGCAATTAGCGTTCCTGGCGGAAACGCTACGTTTACCCTGAACGGTTGCACTGTTAGGGCGAATAACAATAATGTTCTTGTGCTTTCAACACCTTCTGGTAGTGAAGGAATGAGTTTTCGCCCAAATGGCGACACCTCTACGAGTGGCCAAATGACCATTTCGGGAAATGGTGATGTGCTTGTTAATGGCGTTGTAAAAAGTAATGGCGTTGATGTTACAGCATCGCAGAAGCTGCCACTGAAGGAGACAACCGCAACAACCGGGGTTGGCGTTAACTTTATCGGCAGCCACACGACGGAGTGTTCTTTCGGGATTGAAAATACGGCTGGCGGTTCTGCTGTGTTCCATAACTATACGCGCGGTGCGTCTAACAGCGTGACTAAGAATAACCAGCTTTTAGGTGGTTATGGTTCTCGCCCGTGGTTGGGGTCGGACTACACAGCGCACAGTAACGCCGCCTTGCACTTCTTGGGCGCTGGAGATGCATCGGCAACCAATCACGGCGGCTGGATTCGCTTACTTGTCACCCCTAAAGGTAAGACGATTAGCGATAGGGTTCCGGCGTTCAGGCTTTCAGATAATGGAGATCTTTGGCTGGTTCCTGACGGAGTTATGCACCCGGATCTTGGGCTTGTGCGTAGCATTGAAACGCTGAACGCTGCTGTTCCTGGCTTTAACGCTCCAACCAACCAGGATGGTCGCGGATTGAAACTTGTTGGTTCTCCAGCGCCGGAAATTAACATGATCGCGCCGCGAGCCGGGTTAACATCAGCGCCAGCTATTCGGGCCATGTGGTGCGATGGCGATCTTTCAGGAACCTCAAGAAGCGTTGGTGCAACTCAGGCTGGCTCATCGTTCTATATTGGTGCGTCTGGTCATGATGGCCAGAAGTTCGACTCCATGAGGGTTGCAATTTCATTTAGTGCCGTTCAGGGTTGGGGTACGACCAATACACCAACTGATATCTCTTTCGAGACAACCGCTGTTGGTTCGACTGGTCGGAGGTCAGTATGGAGAATCGGCGCTAGCGGTTCATTAGCTCCATCTACCGATAACTCCGTTGATATTGGTGGGGCGTCGGTTAGGGTTGGGCAAGTTTACGCCGTCAGAGGGACAATCAACACCTCCGACGCCAGGTTGAAGAATGACGTTCGAGAAATGAGCAATCCTGAAACCGAAGCGGCCAAAGCCATTGCGAAGGAGATTGGGTTCTGGACGTGGAAAGAGCAAGCCGATATGAACGACGTGCGCGAGCACTGCGGTTTGACCGTACAGCGTGCTATGGAGATCATGGAAAGTTTTGGTCTTGAGCCGTTTAAATATGGCTTCATCTGTTATGACAAGTGGGATGAGCAAACGGTGGTTTCAGAATATGGGCCAGCGAATGAAGACGGGTCGGAAAACCCGATCTACAAAACCATCCCGGCTGGTGATCGCTACTCGTTCCGCCTTGATGAGTTAAACATGTTTATCGCAAAAGGATTTGAAGCGCGTTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a9413be016db68ba437bcd4a74d42e045e60ff2c2408716f97cfbe817b3815c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6137
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50