Protein

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Genbank accession
UYE90202.1 [GenBank]
Protein name
baseplate-related protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTILKSPLNSALRSSFVEGAASSVGRYFTYFNSDVPMYISFPSQLLSLDSTWQIELTAAVSAEGGYLFAQKESTDTVDRLGLYPADDGRIFGLSTQSPSAGGDLSTYLGTSKLTTFMATSDKTDLIYIVDGVEKHRNNVGLRGPQINSAGSPYAGSTSIPYIKGFISEVKITVDDDLKMHLVLDGVYDESNNTVVDLSGKGNHGAVVGASTGVSKMYYKNAEGDWENGSDVLKIS
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25145,72020 Da
isoelectric point:4,73954
aromaticity:0,09362
hydropathy:-0,16085

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE90202.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,8236
Central domain 19 217 200 0,1935
C-terminal 218 235 17 0,9446
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-217
C-terminal
218-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AemP_PT15-A5
[NCBI] 		2981567 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas mediterranea
[NCBI] 		314275 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE90202.1 [NCBI]
Genbank nucleotide accession
OP481051 [NCBI]
CDS location
range 2559 -> 3266
strand +
CDS
ATGACAATATTAAAAAGCCCTTTAAATAGTGCATTACGCAGTTCTTTTGTAGAGGGTGCTGCTTCTAGTGTAGGAAGGTATTTTACTTATTTTAATAGCGATGTCCCGATGTATATAAGTTTCCCTTCTCAATTACTCTCTTTAGACAGCACATGGCAAATAGAATTAACTGCTGCTGTGAGCGCAGAAGGGGGTTACCTTTTTGCACAAAAAGAAAGCACCGATACTGTAGATAGACTAGGATTGTATCCAGCAGATGATGGGAGGATATTCGGATTGAGTACCCAATCTCCCTCTGCTGGAGGTGATTTATCTACATACTTAGGTACAAGTAAGCTGACAACATTCATGGCTACTTCTGATAAAACAGATTTAATCTATATTGTTGATGGGGTGGAAAAACATAGAAATAACGTAGGATTGAGGGGTCCTCAAATAAACTCCGCAGGTAGCCCGTACGCAGGGTCTACTTCAATACCTTACATTAAAGGGTTTATTAGTGAAGTAAAAATTACTGTAGACGACGACCTTAAAATGCACTTAGTTTTAGATGGGGTTTACGATGAGTCTAATAATACTGTTGTAGATTTATCAGGAAAAGGTAACCATGGTGCAGTTGTAGGGGCTTCTACGGGAGTGAGTAAAATGTACTATAAGAACGCAGAGGGTGATTGGGAAAATGGCTCTGATGTGCTTAAAATATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6585d5c470d9ff1460e722a776997db06735962f64eb881d5d501d1e01ec9a2b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Structural and functional assessment of homologous host recognition modules used by distant Alteromonas phage families Gonzalez-Serrano,R., Rosselli,R., Roda-Garcia,J.J., Martin-Cuadrado,A.-B., Rodriguez-Valera,F. and Dunne,M. 2023-03-07 — GenBank