Protein

View in Explore
Genbank accession
QJB23271.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,74
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVVASQNAPVYPASAGAAAGMLEAKSWVSGSNTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTVNTGASTINVSGFGAKAIVGAANFPLTGGELGQGLIAELVFDATGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFIQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPATKLTVGTTNNISGPTGIRNTTSNTGNMNTWGSSSTTASYGNAALQIFGRGSGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVVTDESNIRFHVNSMAGTPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIFSGTLPFAPIASLSDYSQAPLTVYNSPTGPSAKPAVIAFIRPGNWGAFFGIDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPSWNGQTIWRSGNFDPATKVDLNAANATNGNMIFNRISGTGSGIASSGRVGAINLQNGAHSGQAAAVTFERGGGFFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 103030,13330 Da
isoelectric point:5,66153
aromaticity:0,10685
hydropathy:-0,25581

Domains

Domains [InterPro]
DC_0009
ATT
1–209
DC_0009 DC_1924
cd19958
STR
152–231
cd19958
DC_1788
STR
167–699
DC_1788
QJB23271.1
1 964
Architecture
ATT
STR
RBD
ATT 1-209 | STR 210-699 | RBD 764-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage billy
[NCBI] 		2719835 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJB23271.1 [NCBI]
Genbank nucleotide accession
MT133563 [NCBI]
CDS location
range 58735 -> 61629
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACCTCTTCCACTGGCTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGAAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGGCAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGAGTCGGCAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAACGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCCTGGTCGGTGATGCGCTCCAACATACCGATGCCAGCTGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAATGACCTGTTGAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTCGTCGCTTCTCAGAACGCCCCCGTATATCCCGCTTCGGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGGTCCAATACATTCTGCGTTCAACGCTACACTGACCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGGGCCTGGACCAACTGGATGTACGCAGTAAACGTCATGGCCCTCCAACAAGGCCGTGTGACCTATGGGGTCGCGGCTGGCTCGGCGAACGCTTACACGTTGACGCTCGTTCCGCAGCTCCAAGGCGGCCTGGTGGACGGCATGATCCTTCGGGTCAAGTTCAACACCGTTAACACCGGCGCCTCCACCATCAACGTCTCCGGATTTGGCGCCAAGGCCATCGTCGGCGCGGCAAACTTCCCGTTGACTGGTGGAGAACTCGGTCAAGGGCTCATTGCTGAGCTTGTATTCGACGCCACCGGTGACCGTTGGAGGATTCTCGCAGGCGCGCCGCGCATCCAAGTAGGCAACGCCGATCAAGATTATCAGGCTCCCAGCTGGAAACAGGTTAAGGACTATGTAGCGTCCCAAAAGTTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCCATCCAAGACACCACACCGTGGTTCGCCAACCTGGAGCTGTCTGACGCTCGACCTTTCATAGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTACTCTCGCCAGGGGTCCGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCATCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACAACTGCCGATCAGCCCGGTTGGAAATTCACCTTCGCACAAGGTGTGGACGCCAACAACAACGCGGTTATCGCAGTCAATACCACCAACCCGGACGGCTCTTATCGCTCGCAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAATCGCCCTCTGTTTGCTGGACAATATGTTCCGTGGGACTCCGGAAACTTTGATCCGGCCACCAAGCTCACTGTCGGTACTACCAACAACATTTCGGGGCCGACCGGAATTCGCAATACCACCAGCAATACCGGAAATATGAACACCTGGGGCTCCAGCTCCACAACTGCATCGTATGGAAACGCAGCTCTTCAAATCTTCGGTAGAGGGAGTGGCGAGCCTGCGGCCATCTACTTCGACAACTCCCAAACCGGCTGGTATTTGGGCATGGATAAGGACGGCCAGCTGAAGCGAGCAGGCTGGTCGCTCGGCAATAACTCCTATGTGGTCACCGACGAGTCGAATATTCGTTTCCACGTGAATTCCATGGCTGGCACTCCGGTATGGGGCGGAAACGAATTCTGGGGGCCGTGGAACTTCAACCCGAACACCAAGTTGACCATCAAAGCCGGCACGCAGGAAACTAGCAGCACTGCGATATTCAGCGGAACCCTGCCGTTCGCCCCAATCGCGTCTCTGTCCGACTATTCCCAGGCGCCATTGACGGTTTACAACTCGCCGACTGGTCCATCTGCTAAGCCTGCCGTTATCGCGTTCATTCGCCCTGGCAACTGGGGCGCGTTCTTCGGCATCGATACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAACAGCTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCGGCCAACCCGACCGCGCCGTCCTGGAACGGCCAAACCATTTGGCGATCCGGGAATTTTGATCCGGCAACGAAAGTGGATTTGAACGCCGCGAACGCCACCAACGGTAACATGATCTTCAACCGCATTTCGGGAACTGGTAGCGGGATCGCCTCGTCCGGTCGAGTTGGCGCCATCAACCTACAGAATGGAGCGCATTCGGGACAAGCGGCCGCAGTCACTTTCGAGCGCGGCGGTGGTTTCTTCGTCAACTTCGGCTTGGATACCGACAACGTTCTCAAAGTAGGTGGCGGAAACCTGGGGGCAAACGCCTATCCGGTCATCCACGCCGGGAACTACAATAACTACATCAACCAGGCGTTGGTTCAGGTAGGTCTTGGCGGAGTCGGTTCCTATGGAATTTTCGCGGTTCTGGACAATGCCGCTCCAACCGCAACAGTTCAACCCGGAGTGGTCGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAGACCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGACGCCAACACCCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2a6cfc5855fc2c49af1f670c5dc926ad03275d05e157919a77f86b5f6d526e4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3002
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank