Protein

View in Explore

Genbank accession

WDS62242.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,75

Evidence RBPdetect2

Probability 0,97

Protein sequence

MAESNKKGMISGMDSLLSIGGDEFLEVIRMEADGTYKNYRLLVSKIRNNAGLSAYEIAVQNGYVGTVEQWLVSLEGKSAYQIAVDLGFVGDEAAFIASLKGDEGEVGESIYDVALRNGFIGTEADFLKTLVGKSAYQTAVEQGYVGTEAQWLLSLKGAKGDTGDAGKDGDIGPIGPDGKSAFEVWQSQPGNAGKTEAEYLAAQKGETGESAYEAAVKAGFVGTEEEYLKSLEGKSAFDIAKEEDPSLVDEAAFIASLKGETGKSAYEAAKDAGFVGSESDYLKSLEGASAYQLWLDAGNSGTEAQFLESLEGSDGTNGTNGTDGEDGKSAFEIAKELDPSLTTEAAWIASLKGDKGDDGTNGTDGVDGEDGQSAFELWLAQPGNAGKTEADFLNALKGADGDSAYQVAVDDGFVGTLQQWLESLVGEKGDIGQGLNVIDTISEEQFQEVVDLGESVVGDAYIVDTFLHVWNGTAWVKSNSMQGPEGRGLNYLGEWPTGAELPLDVNYKAGDTYVWRSSLWTLVEQPTRRWVDIGVPGPVGKSAYQSWLDIGNTGTESDFIASLKGTKGDRGTDGTNGTNGIDGEKGDDGDSAYAVAVANGFVGTEVQWLASLKGDEGDKGDPALAFEIKGRLTNESELPRPGTPAEAYYVGSDLYIWIVDETTPANSDYVNFGSLNGKSAYDIAVENGFVGTEDVWLASLKGTNGVDGTDGTDGRNLQVKGTQANLAAIQALPTPADQDAWVALDTGHLHIYATSAWIDAGPFRGEDGADGTDGVDGKSVYQIWLDAGNSGTEAEFLATLKGADGADGTDGTNGRNVVIKGSVANQAALPVGAAEQDAYTTLDTGILYMWISGAWVNLGQFKGDKGDKGETGNNGTDGTDGVDGAVGPAGPGLNIKGEVDLIANLPDPSTLEVGDAYYTQEDGRLYQVNDAGVYNPGIYLRGEKGEDGEQGIQGPAGTSITIMGSYATESALKAAHPTGTAGEGYLVGSDLYLYGINPVGGATEWFNAGPVRGPQGEQGIQGKTGLKGNTGNTGERGSLWLVLPNGVFEPTPDYGRAGDWAVNAQFDTFYKDNTSGWLQMGRLVAGDVNSPLPNLGKVVRLGSDWVKLPVDEVPSLVSGKVYGRQLKSGTTDEGEWVEIQFPAFPEPTADGKLYARSRANGQTNGAWTEVPAGIADLTVKDGKNYVRVYEAAGSAPIWKEIVIPSAGIGEAPTTAGKTYLRSGQNTNWVEYTGINAPADAKKYLRTATDWVAFDSYDTASTAVAAGTASATFNAATQQLMDITNTTGAVAKTINFTNLPGAGRATTLVLLVRGSVAALSFQINGTAVTASNLIWNGGVAPTYQAGINVVTFLVIGGASPVLIGAVGAQTAS

Physico‐chemical properties

protein length:	1371 AA
molecular weight:	143136,31370 Da
isoelectric point:	4,25482
aromaticity:	0,08680
hydropathy:	-0,29489

Domains

Domains [InterPro]

DC_1725
STR
30–77

DC_1725 DC_1967 IPR050149 DC_1340

DC_2121
ATT
75–109

DC_2121 DC_2121 DC_1725 DC_1725 DC_2121 DC_1725 DC_1473 DC_1065 DC_1340

DC_1473
STR
163–209

DC_1473 DC_2121 DC_2121 DC_1967 DC_1065

WDS62242.1

1 1371

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

STR 30-74 | ATT 75-174 | STR 175-236 | STR 249-285 | ATT 286-402 | STR 403-446 | ATT 447-586 | STR 587-675 | STR 679-1357 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1725	STR	DC_1725	30	77	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_2121	ATT	DC_2121	75	109	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_1967	ATT	DC_1967	100	133	Novel HMM	DC_1967	N-terminal	Low	Positional only	47 proteins / 47 hits
DC_2121	ATT	DC_2121	131	174	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
IPR050149	Unmapped	-	141	811	InterPro	Collagen superfamily	-	-	-	-
DC_1473	STR	DC_1473	163	209	Novel HMM	DC_1473	Central	Low	Positional only	59 proteins / 59 hits
DC_1725	STR	DC_1725	202	236	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_1725	STR	DC_1725	249	288	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_2121	ATT	DC_2121	286	322	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_2121	ATT	DC_2121	313	369	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_2121	ATT	DC_2121	358	402	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_1725	STR	DC_1725	394	460	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_1967	ATT	DC_1967	447	586	Novel HMM	DC_1967	N-terminal	Low	Positional only	47 proteins / 47 hits
DC_1473	STR	DC_1473	571	675	Novel HMM	DC_1473	Central	Low	Positional only	59 proteins / 59 hits
DC_1065	STR	DC_1065	679	811	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_1065	STR	DC_1065	783	892	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_1340	STR	DC_1340	874	937	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	930	1357	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage D6 [NCBI]	3025445	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Pseudomonas syringae pv. tomato str. DC3000 [NCBI]	223283	Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Genbank protein accession

WDS62242.1 [NCBI]

Genbank nucleotide accession

OQ363659.1 [NCBI]

CDS location

range 150363 -> 154478
strand -

CDS

ATGGCAGAGTCAAATAAGAAGGGTATGATCTCTGGAATGGATTCGCTACTGAGTATCGGTGGCGATGAGTTTCTGGAAGTTATCCGCATGGAAGCGGATGGTACGTATAAAAACTACCGTCTATTAGTTTCCAAGATCCGCAATAACGCAGGTCTGTCCGCTTACGAGATTGCTGTCCAGAACGGCTACGTAGGCACTGTTGAACAATGGCTTGTCTCGTTAGAAGGTAAGTCCGCTTATCAGATCGCAGTCGATCTGGGCTTTGTGGGTGATGAGGCCGCATTCATCGCGTCGCTGAAAGGCGATGAGGGTGAAGTAGGTGAGTCGATCTATGATGTCGCTCTACGTAATGGCTTCATCGGTACTGAAGCTGACTTCCTAAAAACTTTGGTTGGTAAATCGGCTTATCAAACTGCCGTAGAGCAAGGTTATGTTGGTACAGAAGCACAATGGTTACTTTCTTTGAAAGGTGCCAAGGGTGATACCGGCGACGCTGGTAAAGACGGCGACATCGGTCCGATTGGCCCTGACGGTAAGTCTGCTTTTGAGGTCTGGCAATCCCAACCGGGTAATGCCGGTAAGACCGAAGCAGAGTACCTGGCCGCACAGAAAGGTGAAACTGGTGAATCCGCATATGAAGCTGCTGTTAAAGCTGGTTTCGTAGGCACTGAAGAAGAATACCTCAAGTCGCTGGAAGGTAAGTCCGCCTTCGATATCGCAAAAGAAGAAGATCCGTCTCTCGTGGACGAAGCAGCCTTCATTGCATCTCTGAAAGGTGAGACTGGTAAGTCTGCTTATGAAGCCGCTAAAGATGCAGGCTTCGTAGGTTCTGAATCCGATTACTTGAAATCGTTGGAAGGTGCATCGGCTTATCAACTGTGGCTCGACGCTGGTAACAGCGGTACTGAAGCACAGTTCCTGGAAAGCCTGGAAGGTTCTGACGGTACCAATGGTACTAACGGTACGGATGGTGAAGACGGTAAGTCTGCATTCGAGATCGCTAAAGAACTGGACCCATCCCTGACCACCGAAGCTGCTTGGATTGCCTCGCTGAAAGGCGATAAAGGCGACGATGGTACCAACGGCACGGACGGTGTTGATGGCGAGGATGGCCAATCTGCTTTCGAGCTGTGGTTGGCTCAGCCTGGTAACGCAGGTAAAACTGAAGCTGACTTCCTTAATGCACTGAAAGGTGCAGATGGTGATTCGGCCTATCAGGTTGCTGTAGATGATGGTTTCGTAGGTACCCTGCAACAATGGCTGGAAAGTCTAGTTGGTGAGAAAGGGGACATCGGTCAAGGCCTGAATGTTATCGACACTATCTCGGAAGAACAATTCCAAGAAGTGGTTGACTTGGGTGAATCCGTTGTAGGTGATGCTTACATCGTTGATACTTTCCTGCATGTCTGGAATGGTACTGCATGGGTTAAGTCTAACTCGATGCAAGGTCCTGAAGGTCGTGGTCTGAACTATCTGGGTGAATGGCCCACTGGTGCTGAGCTGCCACTCGACGTGAACTACAAAGCTGGTGACACGTACGTATGGCGTAGCTCTCTGTGGACGCTGGTTGAACAACCTACCCGTCGTTGGGTGGACATCGGTGTACCTGGTCCTGTTGGTAAGTCTGCTTACCAAAGCTGGTTGGATATTGGCAACACTGGTACTGAGTCTGACTTCATCGCTTCGCTGAAAGGTACTAAGGGTGACCGCGGTACTGATGGCACTAACGGTACTAATGGTATCGATGGTGAGAAAGGTGATGACGGGGACTCTGCTTACGCAGTAGCTGTAGCCAATGGTTTTGTCGGTACTGAAGTACAGTGGCTGGCATCTCTGAAAGGTGATGAAGGCGATAAAGGTGATCCTGCACTGGCGTTTGAGATCAAAGGTCGTCTGACCAATGAATCGGAACTGCCACGTCCGGGTACCCCAGCTGAAGCCTACTACGTGGGCAGCGATCTGTACATCTGGATTGTTGATGAAACCACTCCTGCGAATTCTGATTACGTCAACTTCGGTTCCCTGAACGGTAAGTCGGCATACGACATCGCGGTTGAAAATGGTTTCGTAGGTACTGAAGATGTTTGGTTGGCTTCCTTGAAGGGCACCAACGGCGTTGATGGTACCGATGGTACTGACGGTCGTAACCTGCAAGTCAAAGGTACCCAGGCTAACCTGGCTGCTATTCAGGCCCTGCCAACTCCAGCTGACCAAGATGCATGGGTTGCACTGGATACTGGTCACCTGCACATCTACGCCACTAGCGCTTGGATCGATGCTGGTCCTTTCCGTGGTGAAGACGGCGCAGATGGTACGGATGGTGTTGATGGTAAGTCTGTCTACCAAATCTGGCTCGACGCTGGTAACAGCGGTACCGAGGCAGAATTCCTGGCTACGCTGAAAGGTGCAGACGGCGCAGATGGTACGGACGGCACCAATGGTCGCAACGTTGTCATCAAAGGCTCTGTAGCTAACCAAGCGGCTCTGCCTGTTGGTGCAGCTGAACAAGATGCCTACACCACTCTGGACACTGGTATCCTCTACATGTGGATCTCTGGTGCTTGGGTCAACCTGGGTCAATTCAAAGGCGATAAGGGTGACAAAGGTGAGACTGGTAACAACGGTACCGATGGTACTGACGGTGTAGATGGTGCGGTCGGTCCTGCGGGTCCTGGCCTGAACATCAAAGGTGAAGTCGATCTGATCGCTAACCTGCCAGATCCATCGACCTTGGAAGTAGGCGATGCTTACTACACCCAAGAAGATGGTCGCCTGTACCAAGTCAACGACGCTGGTGTTTACAACCCAGGTATCTACCTGCGTGGTGAGAAAGGCGAAGATGGCGAACAGGGTATTCAAGGCCCTGCCGGTACCTCGATCACTATCATGGGTTCGTACGCTACTGAGTCCGCTCTGAAAGCTGCACACCCAACCGGTACTGCCGGTGAAGGTTACCTGGTTGGTAGCGATCTGTACCTGTACGGTATCAATCCTGTCGGTGGTGCCACTGAGTGGTTCAACGCTGGTCCTGTTCGTGGCCCTCAGGGTGAACAAGGTATTCAGGGTAAGACTGGTCTGAAAGGTAACACTGGTAATACCGGTGAGCGTGGTTCTCTGTGGCTGGTACTGCCTAACGGCGTGTTCGAACCTACCCCAGACTACGGTCGTGCAGGTGACTGGGCTGTTAACGCACAGTTCGATACCTTCTACAAAGACAACACCTCCGGCTGGCTGCAAATGGGCCGTCTGGTTGCTGGTGACGTTAACTCACCACTGCCTAACCTCGGTAAGGTTGTACGTCTGGGTAGCGACTGGGTCAAACTGCCGGTTGATGAAGTACCGAGCCTCGTAAGTGGCAAGGTCTACGGTCGTCAACTGAAGTCTGGTACCACGGATGAAGGCGAGTGGGTTGAAATCCAATTCCCTGCATTCCCTGAACCAACAGCTGACGGTAAGCTTTACGCTCGCAGTCGTGCTAACGGTCAGACCAATGGCGCTTGGACTGAAGTCCCTGCTGGTATCGCAGACCTGACTGTTAAAGATGGTAAGAACTACGTTCGTGTATACGAAGCTGCTGGTTCCGCTCCAATCTGGAAAGAGATCGTCATCCCGTCCGCGGGTATCGGTGAAGCTCCAACCACAGCAGGCAAGACTTACCTGCGTTCTGGTCAGAACACCAACTGGGTAGAGTACACTGGTATCAATGCTCCGGCAGATGCCAAGAAGTACCTGCGTACTGCAACGGACTGGGTTGCCTTCGATAGCTACGACACAGCATCTACTGCTGTCGCTGCTGGTACGGCTTCCGCAACGTTCAACGCTGCTACTCAACAGCTGATGGATATCACTAACACCACGGGTGCAGTGGCTAAGACCATCAACTTCACTAACCTCCCAGGTGCTGGTCGTGCTACTACCCTGGTGCTGTTGGTCCGTGGCTCTGTCGCGGCTCTCAGCTTCCAAATCAACGGTACAGCAGTTACTGCTTCGAACCTGATCTGGAACGGTGGTGTTGCTCCGACCTACCAAGCTGGTATCAACGTCGTAACCTTCTTGGTTATCGGTGGTGCCTCGCCTGTGTTGATCGGTGCTGTTGGTGCTCAAACCGCCAGCTAA

Genome Context

Tertiary structure

PDB ID

afb784a3d83b084fea6062290bfac0f7fc1022c77b0909a6af5fc0f072485d35

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6457

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence