Protein

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Genbank accession
WHM52940.1 [GenBank]
Protein name
thioredoxin
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSLLLSSVSASAIIAGGGGYPSSPSLTLVHTETDTANTTNNFTFSYNFTETGDYLMAIYGGQGGAGTADSRLEKDVTIDGGASILSLGFEENADYEVISFYHIRIQTEGVHEIDYDQSGTRYRIEAKIYKTTACDFSGQTNVITTQTGSSATATISAAANNAYLGVFQGRGSPTYNYAGTSGGAIPVLEDDFKATTVTGVFSSTQSEDFEVLSSTNNRQQVGVIMIPYLSEEKSISLLIDNATTYVVTGSGKLSIRNAPVYIVANSAPKDKLSVLNSAIYLVATGY
Physico‐chemical
properties
protein length:286 AA
molecular weight: 30217,98310 Da
isoelectric point:4,51815
aromaticity:0,09441
hydropathy:-0,06329

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WHM52940.1
1 286
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9382
Central domain 12 210 200 0,0029
C-terminal 211 286 75 0,9949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-286

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage vB_SupP_AX
[NCBI] 		3038282 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sulfitobacter sp.
[NCBI] 		1903071 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHM52940.1 [NCBI]
Genbank nucleotide accession
OQ722443 [NCBI]
CDS location
range 41768 -> 42628
strand +
CDS
ATGAGTCTTCTTCTCAGTTCAGTTTCTGCATCAGCAATCATTGCTGGAGGGGGTGGCTATCCATCCTCTCCTTCATTGACTCTTGTTCATACAGAAACAGACACAGCTAATACCACTAATAACTTTACCTTCAGCTATAATTTCACCGAAACAGGTGATTACCTGATGGCCATTTACGGTGGTCAAGGTGGTGCTGGTACGGCTGATTCTCGTTTGGAAAAAGATGTCACCATTGATGGTGGTGCTTCTATCCTTTCCCTTGGGTTTGAAGAAAATGCTGATTACGAAGTAATCTCTTTCTATCATATCCGTATCCAAACAGAAGGTGTCCATGAGATTGACTATGATCAAAGTGGTACACGATACCGTATCGAAGCAAAGATTTACAAAACCACTGCATGTGATTTCTCAGGACAAACCAATGTAATCACAACACAAACTGGATCTTCTGCAACCGCAACAATCAGTGCAGCAGCAAACAATGCCTATCTTGGGGTGTTTCAAGGACGTGGATCCCCAACATACAACTATGCTGGCACCAGTGGTGGAGCTATTCCTGTTCTTGAAGATGACTTCAAAGCAACCACTGTAACTGGTGTGTTTTCTTCTACACAAAGTGAAGATTTTGAAGTCTTGTCTTCAACGAACAATCGTCAGCAAGTAGGAGTAATCATGATACCTTACTTGTCTGAGGAAAAATCAATATCTCTCTTGATTGACAATGCAACCACCTATGTGGTCACTGGCTCAGGAAAACTTTCTATCCGTAATGCTCCGGTATATATCGTTGCAAACAGCGCCCCAAAGGACAAACTGTCCGTTCTGAACTCAGCAATCTACTTGGTTGCAACTGGGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7b784e8f26268d4c70ffd2a8139d4815ce7e51392432de7190dc1f772d688c97
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6869
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50