Protein

View in Explore
Genbank accession
UPU15645.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGDSSSSTITWVYNGGSAIGGETEITLDVVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVAPGSTPITTGGVGVGAWISVGDASLRSDLLKDDGYTLIPSVQIQQWRAEGDIRGWGAVDGGFNDSAILAALNSDSPSIKLGGRGFVSKVSDTINHKSNKVIHSGSLNFQFVGGTQQEKSGILMANIANAKVIDVDITGTLDGGIRGYGGSNIVIDGVSVHDIGVSALTGECGMGIWFGDYAHYENQTDGLLIQNCRINNIGGVGIMRGDGIGVYNAKNFTIRHNNTVTVNRMGISTGSDCTYFKVHSNYIGDTLLAAIDIEPDSVYTASNGKVYNNTIVGFASRYFAEGAGVGQTFGIDIHANTSYIKVYGNTLSAGLYGTEAFHIGNNADEIEITDNDLIGGAVVIPLFIKTYDGSGSKHIKINRNRAKSTCSSFADVAMSEDVYISENVFSGNSSNDSYFLRASTIAGLNVDYNRSSNTTNFIKSGDAGNTSNVKVTNNNISTLLDGIDILTSGSLAGFIASGNTILCPASNKGISLEVYGAGSISDLRLRGNIIYNATTKIYVTPSATGWDMLTKNSRTDLTGVQNGTQLFELSRNRVTQFLNGTWDDS
Physico‐chemical
properties
protein length:1011 AA
molecular weight: 107387,83900 Da
isoelectric point:4,69322
aromaticity:0,08408
hydropathy:-0,12700

Domains

Domains [InterPro]
DC_1946
ATT
1–735
DC_1946 IPR006626 IPR011050
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334 IPR006626 IPR006626
IPR040775
RBD
416–481
IPR040775 IPR011050
IPR039448
ENZ
578–773
IPR039448
IPR006626
Unmapped
585–607
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
UPU15645.1
1 1011
Architecture
ATT
STR
STR
ATT 1-735 | STR 736-806 | STR 816-972 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPU15645.1
1 1011
Domain Start End Length (AA) Confidence
N-terminal 1 522 522 0,9973
Central domain 523 973 452 0,9900
C-terminal 974 1011 37 0,9336
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-522
Central
523-973
C-terminal
974-1011

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STP55
[NCBI] 		2924713 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPU15645.1 [NCBI]
Genbank nucleotide accession
OM688977.1 [NCBI]
CDS location
range 40203 -> 43238
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGCGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGCTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGCCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGATTCTAGTTCTTCTACGATTACTTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACGTCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGCTGTGTTAAGCGGGTATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTACTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATACGTAACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACTCACACGGATGGAAAGTATCGTTGGGATGGTACACTTCCTAAAACCGTTGCTCCTGGCTCAACTCCTATTACAACAGGCGGCGTTGGTGTTGGCGCATGGATTAGTGTTGGTGATGCTTCATTGAGAAGTGACTTATTAAAAGATGATGGATACACACTTATTCCATCAGTGCAAATTCAGCAATGGAGAGCTGAGGGTGACATTAGAGGGTGGGGGGCTGTAGACGGTGGATTCAATGATTCAGCCATTTTAGCGGCTCTAAACTCTGATTCACCGAGTATAAAGCTCGGCGGAAGAGGATTTGTTTCCAAGGTTTCCGATACCATTAACCACAAAAGCAATAAAGTGATACATAGTGGTTCCCTGAATTTTCAGTTTGTTGGAGGAACTCAGCAAGAGAAATCCGGGATACTTATGGCTAACATCGCTAATGCCAAAGTGATTGATGTTGATATAACCGGAACCCTGGACGGCGGCATTCGTGGGTACGGTGGAAGCAATATCGTTATTGACGGAGTGAGTGTTCACGACATCGGGGTTTCAGCATTGACTGGCGAGTGCGGCATGGGGATCTGGTTCGGAGACTACGCACACTATGAGAATCAAACTGATGGACTATTAATCCAAAATTGCCGCATTAACAATATTGGCGGTGTAGGCATCATGCGCGGTGACGGCATTGGTGTTTATAATGCTAAAAACTTTACTATTAGGCACAACAACACTGTCACTGTTAATAGGATGGGTATCTCAACAGGTAGTGATTGTACTTATTTCAAAGTACATAGTAATTACATTGGGGACACTCTATTGGCCGCTATAGACATTGAACCTGACTCTGTTTACACAGCCAGTAACGGTAAGGTTTACAATAATACCATTGTAGGATTTGCATCACGTTACTTCGCAGAAGGCGCTGGTGTAGGTCAAACCTTTGGCATTGATATACATGCTAACACCTCTTACATTAAGGTATATGGTAATACCTTGTCAGCAGGGCTGTATGGCACAGAAGCATTCCATATAGGAAACAACGCTGATGAAATTGAGATTACAGATAATGACTTGATTGGTGGCGCTGTTGTAATCCCATTATTCATCAAGACATATGATGGCAGTGGTAGTAAACACATCAAGATAAATAGGAATAGGGCAAAAAGTACGTGTAGTTCATTTGCAGATGTAGCCATGTCTGAAGATGTTTATATTTCTGAAAATGTATTCTCTGGCAATAGTTCTAATGATAGTTATTTCCTGAGAGCGTCAACAATAGCAGGGCTTAATGTTGACTACAACCGGTCAAGTAACACAACCAATTTCATTAAGTCTGGTGACGCTGGTAACACGTCAAACGTGAAGGTCACTAATAATAACATCTCTACTCTTTTAGATGGTATAGACATACTAACTTCTGGTTCCCTGGCTGGTTTTATTGCTTCTGGCAACACTATTTTATGTCCAGCATCCAACAAAGGAATTTCACTTGAAGTATATGGTGCAGGTTCTATTTCAGACCTCAGGCTCCGTGGCAACATAATTTACAACGCGACAACAAAAATATATGTAACACCGTCAGCAACAGGGTGGGATATGTTAACCAAAAATAGCAGGACGGACTTAACAGGAGTACAAAACGGCACTCAGCTATTTGAACTATCAAGGAATAGAGTTACTCAATTTTTAAACGGAACATGGGATGATAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0f7e5debc5404e95cc1a03ecb8ec39840f38a7fb0806e08b09b8cabf72c9b6dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7420
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50