Protein

View in Explore
Genbank accession
WEL95537.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,62
Protein sequence
MTGRNKLLNAGFTRTSRGPGGTFSNFTTEFYSVDQWVISGVSMSGSWGRNQLNGASNTLAEGRNYFAVNITSANLASVGQKIESVHTLAGGKATLSVWLRSTVAGKRLGFRIYQSFGTGGSPSAALSTIITPTPLTLSTTWQKYTITFDVPSVSGKTLGTNNNDYLYAVFDITNTNSYGGVLSGQTGQIEFAFPQLEKGSVATEFEFRAPGVEKALCEWYLKAGVIALRGNGTGGAGAGTFIAHEMRAAPTVTFANTIYYYNCSGINYASYASGSEILVNATGTFAFYSTYIMSAEL
Physico‐chemical
properties
protein length:297 AA
molecular weight: 31591,96220 Da
isoelectric point:8,96796
aromaticity:0,12458
hydropathy:-0,02896

Domains

Domains [InterPro]
G3DSA:2.60.120.260
STR
24–225
G3DSA:2.60.120.260
DC_2119
STR
38–162
DC_2119 DC_0786
IPR008979
STR
46–153
IPR008979
WEL95537.1
1 297
Architecture
STR
RBD
STR 24-225 | RBD 226-297
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XooS_NR08
[NCBI] 		2953619 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEL95537.1 [NCBI]
Genbank nucleotide accession
OQ055246.1 [NCBI]
CDS location
range 29293 -> 30186
strand +
CDS
ATGACTGGCCGTAACAAACTCCTGAACGCAGGCTTTACTCGGACGAGTCGGGGCCCGGGTGGCACCTTCAGCAACTTTACGACTGAGTTCTATTCCGTCGATCAGTGGGTGATCAGTGGCGTGAGTATGAGTGGCAGCTGGGGACGCAATCAATTAAACGGTGCAAGCAATACATTGGCAGAGGGCCGCAACTACTTTGCCGTGAATATAACTTCCGCCAACTTGGCATCTGTAGGCCAAAAAATTGAGAGTGTACACACGCTTGCCGGCGGTAAGGCGACACTAAGTGTGTGGCTGCGCTCTACCGTGGCCGGAAAGAGATTAGGTTTCCGGATCTACCAATCCTTCGGCACAGGTGGCAGCCCGTCTGCTGCTCTTTCGACCATCATTACGCCAACGCCACTTACGTTGTCCACGACCTGGCAAAAGTATACGATAACTTTCGATGTGCCGTCCGTATCGGGTAAGACCCTTGGAACGAACAACAATGACTACCTGTACGCGGTATTTGATATCACAAACACCAATAGCTATGGCGGCGTATTGTCTGGCCAGACTGGTCAAATTGAGTTCGCTTTCCCGCAGCTGGAAAAGGGATCCGTTGCAACTGAGTTTGAGTTCCGTGCACCGGGCGTGGAGAAGGCATTGTGTGAGTGGTACCTAAAGGCTGGGGTTATTGCTCTGCGAGGAAACGGTACTGGTGGTGCTGGCGCAGGTACTTTTATTGCGCATGAGATGCGTGCAGCGCCTACGGTGACATTTGCTAACACAATTTACTATTACAACTGCTCGGGTATTAACTACGCATCGTATGCTAGTGGCTCTGAGATTCTTGTGAATGCAACCGGGACTTTCGCGTTTTACTCAACCTACATTATGTCGGCGGAGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02e4fa16c01d9edf2b69f83a6930b733fcb26afb998800d04c2b3bbe577698b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophages infecting Xanthomonas oryzae pv. oryzae and genomic characterization of novel phage vB_XooS_NR08 for biocontrol of bacterial leaf blight of rice Jain,L., Kumar,V., Jain,S.K. and Kaushal,P. — — GenBank