Protein

Genbank accession
YP_010672644.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPLDGARYISQMTETLPNNTDPRSEGAGQIRAVKRVLKNTFPNIDGPVDVDPDLLNILHQHLFTRGMMMEWTGPINQIPEYWTFADGITVQLAEGGTYTPPDFRDKFSKCASYDSNGLPIEDVGETGGDHNGVASHEHPHTHSRGTMEIEGSMTKISETWADSGEAEGAFEKQGGHPGPKTPRETDTSNTGRMRFKASNNWTGVTSQPEGDGVVAGTDGGNQPAYRITAYIVYVGPHTK
Physico‐chemical
properties
protein length:239 AA
molecular weight: 26017,36110 Da
isoelectric point:5,11945
aromaticity:0,07531
hydropathy:-0,73054

Domains

Domains [InterPro]
SSF88874
63–232
SSF88874
YP_010672644.1
1 239
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Vp_R1
[NCBI] 		2059867 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010672644.1 [NCBI]
Genbank nucleotide accession
NC_070978 [NCBI]
CDS location
range 84190 -> 84909
strand +
CDS
ATGCCTTTAGATGGAGCGAGATATATATCTCAAATGACAGAAACATTACCTAACAATACAGACCCTCGTTCAGAGGGCGCTGGACAAATTAGGGCAGTGAAGAGGGTGTTGAAAAACACCTTCCCAAATATTGATGGTCCAGTTGATGTGGACCCAGACCTACTTAACATATTACACCAACACCTTTTCACTCGTGGGATGATGATGGAGTGGACAGGACCAATAAACCAGATACCAGAATACTGGACATTTGCAGATGGTATTACAGTACAACTAGCTGAAGGTGGTACTTACACTCCACCAGACTTTAGAGACAAGTTCAGCAAGTGTGCTAGCTATGATTCAAATGGATTACCTATTGAAGATGTTGGTGAAACTGGTGGTGACCACAATGGGGTCGCTAGTCACGAACACCCTCACACTCACTCACGAGGTACAATGGAAATTGAAGGTTCAATGACCAAGATCTCTGAGACATGGGCAGACTCTGGTGAAGCAGAAGGTGCTTTCGAGAAGCAAGGTGGTCACCCAGGTCCTAAAACTCCTCGTGAGACTGATACATCCAACACTGGTAGGATGCGATTTAAGGCATCTAACAATTGGACAGGTGTAACATCCCAGCCAGAGGGTGATGGTGTAGTTGCAGGTACAGATGGTGGTAACCAACCAGCTTACCGTATCACAGCTTACATTGTATATGTTGGTCCACATACTAAATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2e6dab64296dc6e9ff106cb4edbf8d0740c490827d349af991b47bde3a6f8952
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6738
Evidence 0,6738
Download PDB

Literature

Title Authors Date PMID Source
Genomic analysis of a novel phage Vp_R1 lytic to Vibrio parahaemolyticus Ren,H. and Li,Z. 2023-06 — GenBank