Protein

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Genbank accession
AIX23988.1 [GenBank]
Protein name
sericin 1 precursor-like protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MASTLRTDNISTLSGTGQINILQSASVDGNIDFTGSLLQNGLPFVTLPEQSIETMGASLCSDGVTAFWAHPNTFKDNAGSTAMPPGDANTTGINLQNPTTPASGYLPFDGPGNWYDYQGNSYSLTVGSEFKYRSIITHGFLAGGYRGANPWRTINQTFHATDVTICRGDQLDRAAAYVDGNYGDYNGYIYGGNNSWGGNSAHTSSINLHTGTGRTAGSSPDYNTTDNYGTTPDTIGVGWDLYGSINDGGAVSGQTTQRGYITGGGDQGSSSWGRLNFSSELMSRVPGGFTNDFVSSTDGELRGYAHGDNGSSRYIEFATESTGAWSTSNKSGDGWKKSLSTKWNIGYHGNGNNVTQPWMKFTHNTGAYISTFNQIDVASGEENMEAGQDWGYMLGNYSGGGGSGNARQNNRTMKIFHANDSMTMMGYKTEPKGHQGQSSGACVSAAFTVTSTRYQ
Physico‐chemical
properties
protein length:455 AA
molecular weight: 48378,68800 Da
isoelectric point:5,19613
aromaticity:0,10989
hydropathy:-0,60923

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX23988.1 [NCBI]
Genbank nucleotide accession
KJ019069 [NCBI]
CDS location
range 98615 -> 99982
strand +
CDS
ATGGCATCAACATTAAGAACTGACAATATTTCAACTTTGTCGGGGACGGGGCAAATTAATATTTTACAAAGTGCTTCTGTTGACGGAAACATAGATTTTACGGGCAGTCTTTTACAAAACGGATTGCCATTTGTCACATTACCAGAACAGTCCATAGAAACTATGGGAGCTTCGTTGTGTTCGGATGGAGTTACTGCTTTTTGGGCGCATCCAAATACATTTAAAGATAATGCTGGTAGTACTGCGATGCCTCCCGGCGATGCAAATACTACTGGCATTAACTTACAAAATCCAACAACTCCAGCATCTGGGTATTTACCATTTGATGGACCAGGAAACTGGTATGACTATCAAGGAAATTCATATTCTCTTACCGTAGGTTCCGAATTTAAATATAGAAGTATTATTACTCATGGATTTCTCGCAGGAGGATATAGAGGAGCAAATCCATGGAGAACAATCAATCAAACATTTCATGCTACTGACGTTACTATTTGCCGTGGAGACCAGCTAGACAGAGCAGCGGCATACGTTGACGGAAATTATGGCGACTATAATGGATACATTTATGGTGGCAATAATTCTTGGGGTGGTAACTCAGCACATACATCTTCTATTAATTTACATACTGGAACAGGTAGAACAGCTGGATCATCTCCTGACTATAACACAACTGATAACTATGGAACTACACCAGATACTATTGGTGTTGGTTGGGATTTGTATGGTTCTATTAATGACGGAGGAGCAGTTTCTGGTCAAACCACACAAAGAGGTTACATAACAGGTGGTGGTGATCAAGGAAGTAGTTCTTGGGGAAGATTAAATTTTTCTTCCGAACTTATGTCTAGAGTTCCTGGTGGTTTTACAAATGACTTTGTTTCTTCTACTGATGGAGAACTTAGGGGATATGCTCATGGTGATAACGGCAGCTCTAGATACATTGAATTTGCTACTGAATCTACTGGTGCATGGAGCACATCAAACAAATCTGGTGATGGATGGAAAAAATCTTTATCGACTAAGTGGAATATTGGTTATCATGGAAATGGTAATAACGTAACTCAACCGTGGATGAAATTTACTCACAATACTGGTGCTTATATCTCAACCTTTAATCAGATTGACGTTGCTTCTGGAGAAGAGAATATGGAAGCAGGTCAAGATTGGGGATATATGTTGGGTAACTATTCTGGTGGTGGTGGTTCTGGTAACGCTCGTCAGAATAATAGAACTATGAAAATTTTCCATGCTAACGATAGTATGACCATGATGGGATACAAAACAGAACCAAAAGGACACCAGGGACAATCCTCTGGTGCTTGTGTATCAGCAGCATTTACTGTAACATCTACTAGGTATCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
48c3eb41f4a9aca7a2ee19563556fb364ef890fcb7c01f0e0d74c9033eae3a63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4334
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank