Protein

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Genbank accession
AVR75934.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKQEILERLPKTGEFRFFFYKKDGTVREAYATLDHSVISEYWQPKGGGYEEAEDVIRYFDLEALAWRSFKVENFIDVALW
Physico‐chemical
properties
protein length:80 AA
molecular weight: 9575,69210 Da
isoelectric point:4,93342
aromaticity:0,18750
hydropathy:-0,46125

Domains

Domains [InterPro]
IPR024401
STR
11–75
IPR024401
AVR75934.1
1 80
Architecture
STR
STR 11-75 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AhSzq-1
[NCBI] 		2138298 Uroviricota > Caudoviricetes > Demerecviridae > Shenzhenvirus AhSzq1 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR75934.1 [NCBI]
Genbank nucleotide accession
MG676224.1 [NCBI]
CDS location
range 22527 -> 22769
strand -
CDS
ATGAAGCAGGAAATTCTTGAGAGACTCCCTAAAACTGGGGAGTTTCGATTCTTCTTCTACAAAAAAGATGGCACAGTTCGAGAAGCCTACGCCACTCTAGACCACTCAGTAATTTCAGAGTATTGGCAGCCTAAGGGCGGTGGGTATGAAGAGGCTGAGGACGTTATCCGGTATTTTGATTTAGAGGCTTTAGCTTGGCGAAGTTTCAAAGTGGAGAATTTTATTGATGTAGCTTTATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f738bf99c3b35262c3bc5acd8a97fbb864f734fd2760fab7b4500e8f8eb699a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of T5-related Aeromonas hydrophila phages AhSzq-1 and AhSzw-1 and proposal to be two new species Chen,L., Yuan,S. and Ma,Y. 2018-03-19 — GenBank