Protein

View in Explore
Genbank accession
YP_007675048.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVQGHTCYGGSGDNVWVAGDDIPLLPDSAIPGQNTRSTQGSPEPPIVPQPGSEIRQVVGNCYSPSAPVRLTPDTTPDIPRTTQGPPVPAQEEQAGEVIRAIVARCYPATAPKPEPPADVPIDPRIVGPIDPCKLLEPIRESFPSLEFPFCPNDWTWDIPVPWAPDGPYIGKGSDCDRVIAGLSNGTVRKSEDRLKVNIYVEILTGQELYCDLGENNGDQDWGECVKDAIDCIFKPYVTGTWRTPAADCDTQYFRGQNSESGEICVKNCYPLRVPIYEYKKGSSPGNVQIMPFGNGFHNKRLCTTDTSGNWTQEKVRCEGGNAVFNSTTTQTQTFTSNGLTITVKVTPINDGGEYDSRWWVESFSGTMPAVGTTWNHSWNGGKGTVSVKVTIIEGPGSGHDTAYGREEIAPAGYTLANTEPAFYILDRKARESVPLFKFYSIPNVDTFMTTNPGSPDSEGAGERATMDAQSMGQGEILGYVYKNKEDAIPFLADDETIMPLHRYYAASSVPSLNDHMYSLQQMDIEQPPQYGRRLTYRLPNNPKTSWIVSYKMVKPSAAYQNSWGVYISNSDASEIFWTKTIKANVNVNSAYGQFEVPLTVLKQYPNQRMGFYLIPNGNNYGVSDNDSPSLYASGSGWKRSGGSAQSDWVFFSDPYMNPDNRTKTRWVGDNWQWWEDLLNGDDDYTDFKVHYEVLAPGSAYKYEGVQCYVYEDPNPPRITIPIKTKDNCATQTFDGEFMDVALTRSECGIDNPSYTNGEVSVQCGTCTGGYVIEINRTQSIKALRNGRFQLKAFGSIITNTDTDCLTFRFTLKKNGSSVVDETYEVATWPNVGNNLGSEFTVEEGDTLTLKAEDILSGPPFGNVSVTMAMFEVNRQEFETPVSFQLGAIASDEVGQSATEVASNSPTGSSIKKMSIQLWNHQTEDWSTKVTVWDNGQVNTNANWNSQTYDESDGNASSFSDTYYSGDPNSIGNCMGLAPCPYPLYENTSGNNVINRNGLILSTRIDNYKSYNAAHNGGCFYNTLFEHGRGLIVRPVNQLSSSSNLKGKLDKWSHHSFGSGITSWYMQPALTMASSATNALQDIDGFYSAGIQAWSGGTTGSPYGGQYSKQCFMHDYVLGKDASGSNMSATDNDPTGKIRVAIWPYAEESSPGNRDYWGAAIELFDLVNAGTAYGQGQQFELEWPPEQPKGGTYQSLPGTTPYYPKDDPSYSFPNEIVVPVRASDDDDDNRFTPREAFYQESHNRNSNIWVLCQHKVHRIKFRITIDEVT
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 140104,27290 Da
isoelectric point:4,75273
aromaticity:0,10875
hydropathy:-0,56462

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM6
[NCBI] 		929832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007675048.1 [NCBI]
Genbank nucleotide accession
NC_020855.1 [NCBI]
CDS location
range 3697 -> 7506
strand -
CDS
ATGAGTGTCCAAGGACATACCTGTTACGGAGGATCAGGAGATAATGTTTGGGTGGCAGGGGATGACATTCCTTTGCTACCCGATTCTGCTATTCCAGGACAGAACACTAGATCTACTCAGGGTTCACCCGAACCACCGATAGTTCCACAACCAGGAAGTGAGATAAGACAGGTTGTTGGTAACTGTTATAGTCCTAGTGCACCTGTACGTTTAACACCAGACACTACACCTGACATACCTAGAACTACACAAGGACCACCTGTACCTGCACAGGAAGAACAAGCAGGAGAAGTTATAAGAGCTATCGTTGCACGATGTTACCCTGCAACTGCACCTAAACCAGAACCCCCTGCAGATGTACCGATAGACCCAAGAATTGTTGGTCCTATAGATCCCTGTAAATTATTAGAACCTATTAGGGAATCATTCCCTTCACTAGAGTTTCCTTTCTGTCCTAATGATTGGACGTGGGATATACCTGTACCTTGGGCACCTGATGGTCCTTATATTGGTAAGGGTAGTGATTGTGATAGAGTAATTGCAGGTCTATCTAATGGTACTGTTAGGAAGTCAGAGGATAGATTAAAAGTAAACATATATGTAGAGATACTTACAGGTCAGGAATTATATTGTGATCTAGGAGAGAACAATGGAGATCAAGACTGGGGTGAGTGTGTAAAGGATGCTATCGATTGTATCTTTAAACCATATGTCACAGGTACATGGAGAACACCTGCTGCTGATTGTGATACACAGTACTTCCGTGGTCAGAACTCAGAGAGTGGTGAGATATGTGTGAAGAATTGCTATCCACTTCGTGTTCCCATCTATGAGTACAAGAAAGGATCATCACCAGGTAATGTACAGATCATGCCTTTCGGTAATGGTTTCCACAACAAGAGACTATGTACCACAGATACATCAGGTAACTGGACACAAGAGAAGGTAAGATGTGAGGGTGGTAACGCAGTCTTTAACAGTACAACTACACAGACACAAACATTTACATCTAATGGACTGACGATAACAGTCAAGGTCACACCGATCAATGATGGTGGTGAGTATGATAGTAGATGGTGGGTGGAATCATTCAGTGGTACCATGCCAGCTGTCGGTACTACATGGAATCATTCATGGAATGGAGGTAAAGGTACTGTTAGTGTCAAGGTAACTATCATAGAAGGACCAGGCTCAGGACATGACACTGCTTATGGTAGAGAAGAGATAGCACCTGCAGGATATACATTAGCTAACACCGAACCTGCTTTTTATATACTTGATAGGAAAGCAAGAGAGTCAGTACCTCTCTTTAAGTTCTACTCCATACCTAACGTTGATACATTCATGACAACTAATCCAGGTTCACCTGATAGTGAAGGAGCAGGTGAACGTGCGACTATGGATGCACAAAGTATGGGTCAAGGAGAGATACTAGGATATGTTTACAAGAATAAAGAGGATGCTATTCCTTTCCTAGCAGATGATGAAACTATCATGCCACTGCATAGGTACTACGCAGCTAGTTCTGTACCATCACTCAATGATCACATGTATTCATTGCAGCAGATGGATATTGAGCAACCTCCTCAGTATGGTAGAAGATTAACTTATAGATTACCTAACAACCCTAAGACATCATGGATCGTCAGTTATAAGATGGTCAAACCTAGTGCAGCGTATCAAAACTCATGGGGTGTGTACATTTCTAACTCAGATGCTAGTGAAATATTCTGGACTAAGACTATTAAGGCTAACGTTAATGTGAATAGTGCTTACGGACAGTTTGAGGTACCACTGACTGTTCTGAAACAGTATCCTAATCAGAGGATGGGATTCTATTTAATACCTAACGGTAACAACTATGGTGTGAGTGACAACGATAGTCCTTCTTTATATGCATCTGGTTCTGGATGGAAGAGATCTGGTGGTAGTGCACAGAGTGATTGGGTATTCTTCTCAGATCCATACATGAATCCTGATAATAGAACTAAGACACGATGGGTTGGTGACAACTGGCAGTGGTGGGAGGATCTTCTCAATGGTGACGATGATTACACAGACTTTAAGGTACACTATGAAGTCCTAGCACCAGGTTCTGCATACAAATATGAAGGTGTGCAGTGTTATGTTTATGAAGACCCTAACCCACCAAGGATTACTATACCAATCAAGACTAAAGATAACTGTGCTACTCAGACATTTGATGGTGAGTTTATGGATGTTGCACTCACTAGATCAGAGTGTGGTATTGATAACCCATCCTACACAAACGGAGAAGTATCAGTACAGTGTGGTACATGTACTGGTGGATATGTTATAGAAATTAATAGGACACAGAGTATCAAAGCATTGAGGAATGGTAGGTTCCAACTCAAAGCATTCGGTTCTATCATTACTAACACCGACACTGACTGCTTGACATTCAGGTTTACCCTGAAGAAGAATGGATCATCTGTCGTGGATGAAACGTATGAGGTAGCTACTTGGCCAAACGTTGGTAACAATCTAGGTAGTGAGTTCACTGTAGAGGAGGGTGATACACTGACTCTAAAGGCAGAGGATATTCTTAGTGGTCCTCCATTCGGTAACGTTAGTGTTACTATGGCAATGTTTGAGGTCAACAGACAGGAGTTTGAGACACCAGTATCATTCCAGTTAGGTGCTATCGCTAGTGATGAGGTAGGACAGAGTGCTACTGAGGTTGCTTCTAATAGTCCTACTGGTTCTTCTATCAAGAAGATGTCTATACAGTTATGGAATCATCAGACAGAGGACTGGTCTACTAAGGTCACAGTCTGGGATAACGGACAGGTTAATACTAATGCTAACTGGAACAGTCAAACCTATGATGAATCAGATGGTAACGCTTCTAGTTTCAGTGACACATATTATTCTGGTGATCCTAATAGTATAGGAAACTGTATGGGTCTAGCACCGTGTCCTTACCCACTGTATGAGAACACATCAGGTAATAATGTCATCAATCGTAACGGGTTAATCCTTTCTACCCGTATTGATAATTACAAATCATATAATGCAGCACATAATGGTGGTTGTTTCTACAACACACTGTTCGAACATGGTAGAGGACTGATAGTTAGACCAGTTAATCAACTGTCAAGTTCATCTAACCTTAAAGGTAAGTTAGATAAGTGGTCTCATCATTCCTTTGGATCTGGTATTACATCATGGTATATGCAACCTGCACTCACCATGGCAAGCAGTGCAACCAATGCACTCCAAGATATTGATGGGTTCTACTCAGCAGGTATCCAAGCATGGAGTGGTGGCACTACTGGATCACCTTATGGTGGACAGTATAGTAAGCAATGCTTTATGCATGACTATGTGTTAGGTAAGGATGCTTCTGGTTCTAACATGTCAGCGACTGATAATGATCCTACAGGTAAGATACGAGTAGCAATCTGGCCATATGCAGAGGAGAGTTCACCAGGTAACAGAGACTACTGGGGTGCAGCAATAGAATTATTTGATTTAGTTAATGCAGGTACTGCCTATGGACAAGGACAGCAATTTGAGTTAGAATGGCCACCTGAGCAACCGAAGGGTGGTACATACCAGTCGTTGCCTGGAACTACACCTTATTATCCTAAGGATGATCCAAGTTATTCATTCCCTAATGAAATAGTAGTTCCAGTAAGAGCGTCCGATGATGACGATGATAATAGGTTCACCCCTAGGGAAGCCTTCTATCAGGAGTCACATAATAGGAACTCAAACATCTGGGTACTGTGTCAACACAAAGTACACAGGATTAAATTTAGAATCACAATCGATGAGGTGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3b980bb1b93ae523d4211244fece3b7961a450b1699aad0b4210e45c8d50472
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3538
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM6 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank