Protein

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Genbank accession
YP_009814690.1 [GenBank]
Protein name
central tail fiber J
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MKEVLPSAREYLTDPDNNIKVASLLMMELPSAGGTPQYVHYTDYPRDLVFNNIPYLSGKLKSVSAHRQDTKLTVGNVTFTLSGVDSDEVFRLVRDGVSFIDRQVTIYQAIIKPDGTILPVDSETNGPILFFSGKITAGSIKEGKGEGNSSASTSSIVWTCANEFYDFEQVNGRLTDDATHRGLEIIDGKLVATSSAKKDEYKEDLGFFHSNKSVTILAKYQTQEKRYRMKTKKRLFGLSKSYSLEEYYETVTKEIDIDFNLTAKFIPVVYGVQHIPGIPVFADTLKDDPNIVYVVYAFAEGEIDGFLDFAFGDTPMICYDDKDSEDRTCFGRKRFAGDTMHRLASGIPTTSPTVHGERYEYDDGNGDITMWVYHGKSDQEASKVLVDIAAKEGFLLQSELEHKEGYWDSRFRLLDTAYAVVRFTINENRTDIPEVSATIQGKKVRVYNSDGTFDDSKTSLNPVWQLVDYMRSPIYGAGIPLSKIPIDFTLRTAKLLDTIDTSYESDWLSYWRYIGWTNQSAENRQMIQTNVILETSTSVFKNIESMLEAFSGALNNFAGEYRITTESYDSNPRKLHFNDTIGNLELQDVTARNKYNSVQASIVDPGLGWKTNSVSFFNSEFKKEDRGLDKRMNLSFAYITNYYCARSVAARELKRSRYARELKLTVPYYMLGIEVNDAIAFTYERYGWKDKYFLVKTVSNTIGGKIELTLIERDKSVFINSEQVEQDTSAPPTWETLVTPPRSLEYVPYIDKPLSPDNVIGKNGDLRWKPSTTSSIIYYTVKISGEVDPRIVTNNGESLDSYIVMELKGMAPDTYTIEVRAVDMYGRRSSPAVLVVDINAAVNLNKVQNLTLLNRAPNSLNEWIGKDVLAKWDRISEEVNNEIPDLFYRFQVLHPTNHETIYDGKTTNGNRHIFTYADNRKEYGIREGTPGVYRNLDVRVRAEGINGESSVQWTYIDD
Physico‐chemical
properties
protein length:958 AA
molecular weight: 108664,66070 Da
isoelectric point:5,24547
aromaticity:0,11065
hydropathy:-0,44770

Domains

Domains [InterPro]
DC_0187
STR
225–958
DC_0187
IPR003961
STR
753–836
IPR003961
YP_009814690.1
1 958
Architecture
STR
STR 225-958
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009814690.1
1 958
Domain Start End Length (AA) Confidence
N-terminal 1 313 313 0,9049
Central domain 314 523 211 0,3668
C-terminal 524 958 434 0,0170
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-313
Central
314-523
C-terminal
524-958

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage Stubb
[NCBI] 		2315597 Uroviricota > Caudoviricetes > Demerecviridae > Novosibvirus stubb >
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814690.1 [NCBI]
Genbank nucleotide accession
NC_048086 [NCBI]
CDS location
range 81731 -> 84607
strand -
CDS
ATGAAAGAAGTACTTCCTAGCGCAAGAGAGTATTTAACTGATCCAGATAATAATATTAAAGTAGCTAGTCTACTTATGATGGAACTCCCAAGTGCCGGAGGTACTCCTCAATACGTGCACTATACTGACTACCCAAGAGACTTAGTATTTAATAATATACCATACTTGAGTGGTAAATTAAAATCAGTGTCAGCGCACAGACAAGATACTAAGTTAACAGTTGGTAACGTTACATTCACATTATCTGGTGTCGACTCAGATGAAGTATTTAGATTAGTAAGGGATGGCGTATCCTTTATAGATAGACAAGTAACTATATATCAAGCAATAATTAAGCCAGATGGAACAATACTTCCAGTAGACTCCGAAACCAACGGCCCAATATTGTTCTTCTCTGGTAAAATAACCGCTGGTAGCATAAAAGAAGGCAAGGGTGAGGGCAATTCCTCAGCAAGCACTTCTAGTATCGTTTGGACGTGTGCAAATGAATTCTATGATTTCGAACAGGTAAATGGTAGATTAACTGATGATGCTACTCATAGAGGACTGGAGATTATAGACGGAAAGTTAGTTGCCACTAGTTCTGCTAAAAAGGATGAGTATAAGGAAGATCTAGGATTCTTCCACTCTAACAAGTCTGTCACTATATTGGCAAAATATCAGACCCAAGAGAAACGTTACAGAATGAAGACTAAGAAGCGCCTATTTGGGCTTAGTAAATCATACTCTCTTGAGGAGTACTATGAAACTGTAACCAAAGAAATAGACATAGACTTTAACCTTACGGCTAAGTTTATACCAGTCGTATATGGTGTACAGCATATTCCTGGAATACCTGTGTTCGCTGATACTTTAAAAGATGATCCAAATATAGTATACGTAGTGTATGCATTTGCAGAAGGCGAGATAGACGGTTTCCTAGACTTTGCTTTCGGTGATACACCAATGATATGCTATGACGACAAAGATAGTGAAGATCGTACATGCTTTGGTAGGAAGAGATTTGCTGGAGACACCATGCATAGATTAGCCAGTGGAATACCAACAACATCCCCGACCGTACATGGTGAAAGGTACGAGTATGATGATGGTAATGGTGATATTACTATGTGGGTGTATCATGGTAAATCTGACCAAGAAGCATCTAAAGTCTTGGTAGATATTGCAGCAAAAGAAGGGTTTCTACTACAGAGTGAGCTAGAGCATAAGGAAGGGTACTGGGATAGTAGATTTAGATTACTAGATACTGCGTATGCTGTAGTTCGATTTACTATAAACGAGAATAGAACCGACATACCAGAGGTATCAGCCACTATACAAGGTAAAAAAGTTAGAGTATATAATTCTGACGGAACGTTTGATGATAGTAAAACTAGTCTCAATCCTGTATGGCAATTAGTAGATTATATGAGATCTCCTATATATGGGGCAGGTATTCCACTTAGTAAGATACCCATAGATTTTACGCTTAGAACTGCCAAACTTCTAGATACTATAGATACGTCTTATGAATCGGATTGGCTATCCTACTGGAGATACATAGGATGGACAAATCAATCAGCTGAAAATAGACAAATGATACAGACCAACGTTATTTTAGAAACGTCTACTTCTGTGTTTAAAAATATCGAAAGTATGTTAGAGGCGTTTTCGGGTGCACTAAATAATTTTGCAGGGGAGTATCGTATAACAACGGAATCTTATGATAGTAATCCAAGAAAGCTACATTTTAATGATACTATAGGAAATTTAGAATTGCAAGATGTAACTGCTAGGAACAAGTATAACTCGGTGCAGGCAAGTATAGTAGACCCCGGTCTAGGATGGAAAACTAACTCAGTATCGTTCTTTAATTCAGAGTTTAAGAAAGAGGACAGAGGATTAGACAAGCGAATGAATCTGTCGTTCGCATATATAACTAACTACTACTGTGCAAGGTCTGTGGCAGCTAGGGAATTAAAAAGATCTAGGTATGCTAGGGAGTTAAAACTAACTGTCCCTTACTATATGTTGGGTATAGAGGTAAATGATGCTATAGCATTTACTTACGAGAGATATGGGTGGAAGGATAAATACTTCTTAGTTAAGACAGTATCTAATACTATTGGTGGAAAGATAGAACTTACATTAATAGAAAGAGATAAGTCTGTATTCATTAACTCTGAGCAAGTAGAGCAAGATACTAGTGCTCCACCAACCTGGGAGACACTAGTAACACCACCAAGAAGTTTAGAGTATGTTCCATACATTGATAAACCACTAAGCCCTGATAATGTTATAGGCAAAAATGGGGATCTTAGGTGGAAGCCTAGCACTACATCCTCTATTATATACTATACTGTAAAAATATCTGGTGAGGTAGACCCTAGAATTGTTACTAACAACGGGGAGTCTCTAGATTCATATATAGTTATGGAATTAAAGGGGATGGCTCCAGATACTTATACGATAGAGGTTAGGGCTGTAGACATGTATGGTAGAAGGAGTTCCCCAGCAGTACTTGTAGTAGATATAAACGCAGCGGTAAACCTTAATAAAGTACAGAACCTAACATTACTTAATAGAGCACCTAACTCATTAAACGAGTGGATTGGTAAAGATGTTCTTGCTAAGTGGGATAGAATCTCTGAAGAAGTTAATAATGAAATACCTGATTTATTTTACAGGTTTCAGGTACTGCACCCAACTAACCATGAGACTATCTATGATGGCAAGACAACTAATGGGAATAGGCATATATTTACTTACGCTGATAATAGAAAAGAGTACGGGATACGTGAAGGTACTCCAGGGGTATACCGTAATCTAGACGTTAGAGTAAGAGCAGAGGGCATCAATGGTGAGTCCTCAGTACAATGGACATATATAGATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c068beb09d65142056acc8b52b01c3afa489c2d1da645f32ed386b1244071c52
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2758
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50