Protein

View in Explore
Genbank accession
YP_009824228.1 [GenBank]
Protein name
major tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MHLPNGSQIFIGVNMGEPISATDISNAKDPVFTVSNSQQIKKGAYVLIETSSWGKLVSRVLRVKEVSDNASVTLEGVDTTDQNVFPAGSNTATFREVKSWVEVPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEMETVSLSVSLKGRFTFLPSDVK
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24441,17460 Da
isoelectric point:4,67975
aromaticity:0,09091
hydropathy:-0,30727

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
YP_009824228.1
1 220
Architecture
ATT
TAS
ATT 1-50 | TAS 51-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009824228.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,4855
Central domain 60 209 151 0,0581
C-terminal 210 220 10 0,5783
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_swan01
[NCBI] 		2496549 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus ityhuna
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009824228.1 [NCBI]
Genbank nucleotide accession
NC_048202 [NCBI]
CDS location
range 17734 -> 18396
strand -
CDS
ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAATATGGGTGAGCCAATTAGCGCTACTGATATTTCAAACGCTAAAGATCCGGTTTTTACTGTTAGTAATTCACAGCAGATCAAAAAAGGTGCTTATGTTCTGATTGAAACGTCTTCCTGGGGTAAACTGGTTAGTCGTGTGTTGCGGGTAAAAGAAGTATCTGATAACGCAAGCGTAACTCTTGAAGGTGTAGACACAACCGATCAAAACGTATTTCCGGCTGGTTCTAATACAGCAACTTTCCGAGAGGTGAAATCTTGGGTAGAGGTTCCTTGCGTACAGGATCTTGCTCAGGACGGCGGCGAGCAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAGGAACAGCAGTTGCCGACCTACAAGAGCGCCGTTTCTCTTACCTATACTTTCGCGCATGAATATGATAATCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTAACCGCTTTGCGTATGTACGTGCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTATTGTCTTTTAATGACATTCCGCAAACAACTATGAACGAAATGGAAACTGTTTCCCTTTCTGTATCTCTGAAAGGCCGATTCACGTTCTTACCTTCCGACGTTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd74d995f32c81963b481f8fe5ccd26c418707c374927ae01d9ee9f9947e792b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9424
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50