Protein

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Genbank accession
YAL64049.1 [GenBank]
Protein name
putative exo-alpha-sialidase
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAGYKKSLMSYKPSCLLTFDGESFHDGDGYLRYPYIHDETGNENHGYVITTNSPIKSYALGSGSLVDRESGYDQFSIQFAPRSHDTKMPFPYDRSVVEIMHSESIKMRDEFTIMFLFKKDNRDGFFAGAQYNPDKNIYETTNYTYKDFKRTIFRKGVLVGLDWESYYYSGIQKLRFIFPDHNYEWQVPSEFYGRTYHIAMTRKKNKIGTSLYQTVDTVYMDGIIIYTKTSNITSETSTAFSTSSIFLGGNADALNYFTLNDRQTSPLWIDNFTVFSEVCLDANQIANLYKKCFYYKTYTRRQAPTLYAMFDDPEINPSLTSHTGRLEMGTGTLTYFGTTSQLKTGVDGPIRLMGDVAAQFKSGGMARIVNSSSQYLNPAINSSGDWTLEFFARFNTSTRGVLLSAQTDYEPYKGILIEANMLDEVETVGAIQVKLESGITLGTRNIDSQGNLIRYNDDKFHLYTVIRRGTQIELWIDGTLIDTRYGNSGNMINSFGTIYLFGMMPNKNHVDGAISHLAYYQYAMQDQMIKAKSFFYTRMKIKGNITLQGSPHRATLRIMNHSTGEVVTEGQSNQNTGNYEIDIYTDQFVDVLVFDKKDPNVRYRAFGPLLAGEYTDIDDIDP
Physico‐chemical
properties
protein length:622 AA
molecular weight: 70915,80350 Da
isoelectric point:5,85705
aromaticity:0,13505
hydropathy:-0,43955

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
23–291
G3DSA:2.60.120.200 G3DSA:2.60.120.200 DC_1702
IPR013320
STR
37–292
IPR013320 IPR013320
IPR013320
STR
37–290
IPR013320 IPR013320
YAL64049.1
1 622
Architecture
STR
STR
RBD
STR 23-292 | STR 362-550 | RBD 551-619 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAL64049.1
1 622
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5612
Central domain 11 208 199 0,8008
C-terminal 209 622 413 0,2724
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-208
C-terminal
209-622

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbIJP1
[NCBI] 		3411817 No lineage information
Host Acinetobacter sp.
[NCBI] 		472 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAL64049.1 [NCBI]
Genbank nucleotide accession
PV126534 [NCBI]
CDS location
range 104040 -> 105908
strand +
CDS
ATGGCAGGTTATAAAAAATCGTTAATGAGTTATAAACCATCATGTTTATTAACATTTGATGGTGAATCATTTCATGATGGTGATGGATATCTAAGATACCCATATATACATGATGAAACAGGTAATGAAAATCATGGTTATGTTATTACAACTAATTCGCCTATTAAATCATATGCGTTAGGTTCAGGTTCTTTAGTTGACCGTGAATCAGGTTATGATCAATTTAGTATACAATTTGCACCACGTTCACATGATACTAAAATGCCTTTCCCATATGATCGTTCCGTTGTAGAAATTATGCATAGTGAATCTATTAAAATGCGTGATGAATTTACAATTATGTTTTTATTTAAAAAAGATAATAGAGATGGTTTCTTTGCAGGGGCGCAATATAACCCTGATAAGAACATATATGAAACAACTAACTATACATATAAAGATTTCAAAAGAACAATTTTTAGAAAGGGTGTATTAGTCGGTTTAGATTGGGAATCTTATTACTATAGTGGTATTCAAAAATTACGTTTTATTTTCCCTGATCATAACTATGAATGGCAAGTACCAAGTGAATTTTATGGTCGTACATATCATATTGCAATGACAAGAAAGAAAAATAAGATTGGTACAAGTTTATATCAAACTGTTGATACTGTTTATATGGATGGTATCATCATTTATACAAAAACAAGTAATATTACAAGTGAAACAAGTACGGCGTTTAGTACATCAAGTATTTTCTTAGGTGGTAACGCTGATGCTTTAAACTACTTCACATTAAATGATAGACAAACATCACCATTATGGATTGATAATTTTACAGTCTTTAGTGAAGTATGTTTAGATGCAAATCAGATAGCAAATTTATATAAAAAATGTTTTTATTATAAAACTTATACCCGTAGGCAAGCACCTACATTATATGCAATGTTTGATGACCCTGAAATTAACCCTAGTTTAACTTCACATACAGGAAGATTAGAAATGGGTACAGGTACATTAACTTATTTTGGTACAACATCACAATTAAAAACGGGTGTAGATGGACCAATTCGGTTAATGGGTGATGTTGCTGCCCAATTTAAAAGTGGTGGTATGGCACGTATTGTTAATTCATCTTCTCAATATTTAAACCCTGCTATTAACTCAAGTGGTGATTGGACTTTAGAATTTTTTGCAAGGTTTAATACTTCAACTAGAGGTGTTTTATTATCAGCACAAACAGACTATGAACCATATAAAGGTATTTTGATTGAAGCTAATATGTTAGATGAAGTTGAAACAGTTGGTGCAATTCAAGTTAAATTAGAAAGTGGTATTACGCTTGGTACTAGAAATATTGATTCTCAAGGTAACTTAATAAGATATAATGATGATAAATTTCATCTATATACTGTAATACGCCGTGGTACACAAATTGAACTATGGATTGATGGAACATTGATTGATACAAGATACGGTAATAGCGGTAATATGATCAATTCATTTGGTACAATTTATCTATTTGGTATGATGCCTAATAAGAATCATGTTGATGGTGCAATTAGTCATTTAGCTTATTATCAGTATGCAATGCAAGATCAAATGATTAAAGCAAAATCTTTTTTCTATACAAGAATGAAAATAAAAGGTAATATTACACTACAGGGTTCACCACATCGGGCAACTTTAAGAATTATGAATCATTCAACAGGTGAAGTTGTAACTGAAGGTCAAAGTAATCAAAATACAGGTAATTATGAAATTGATATTTATACTGATCAATTCGTTGATGTTCTTGTATTTGATAAAAAAGATCCAAACGTGCGCTATAGGGCATTTGGACCACTTTTGGCAGGTGAATATACAGATATTGATGATATTGACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f66e5187ae04ecdd460330d2db750d049c7c18f0d92da6ee1ab71d4997357d1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50