Protein

Genbank accession
YP_007011138.1 [GenBank]
Protein name
collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MDIKKILLASLLSSTAIVGGCDLSDKKAATALKLAQDTHTLVENTREKAEEALNLVRNANGKPGPQGPQGPQGPQGPKGQTGDKGPQGPQGPQGQTGDKGPQGPQGPKGQTGDKGPQGPQGQTGDKGPQGPKGQTGDKGPQGPQGQTGDKGPQGPQGQTGDKGPQGPQGPQGQTGDKGPQGPQGQTGDKGPQGPQGPQGQTGDKGPQGPQGQTGDKGPQGPQGPKGQTGDKGPQGPQGQTGDKGPQGPQGQTGDKGPQGPQGQTGDKGPQGPQGQTGDKGPQGPQGPQGQTGDKGPQGPQGPQGQTGDKGPK
Physico‐chemical
properties
protein length:312 AA
molecular weight: 30517,48750 Da
isoelectric point:9,23202
aromaticity:0,00000
hydropathy:-1,58173

Domains

Domains [InterPro]
PS51257
1–21
PS51257 Coil IPR008160
IPR050149
60–311
IPR050149
IPR008160
61–116
IPR008160
YP_007011138.1
1 312
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Liberibacter phage SC2
[NCBI] 		941970 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Liberibacter asiaticus
[NCBI] 		34021 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Candidatus Liberibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007011138.1 [NCBI]
Genbank nucleotide accession
NC_019550 [NCBI]
CDS location
range 35739 -> 36677
strand +
CDS
ATGGATATCAAGAAAATATTATTAGCATCTTTATTGTCATCAACTGCTATAGTAGGAGGTTGTGATCTTTCTGACAAAAAGGCTGCAACAGCTTTGAAGCTTGCACAAGATACTCATACATTGGTGGAAAACACTAGAGAAAAGGCTGAAGAAGCTTTGAACCTTGTGAGAAATGCCAACGGAAAACCAGGACCTCAAGGACCTCAAGGACCTCAAGGACCTCAAGGACCTAAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTAAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTAAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTAAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTCAAGGACCTCAAGGACCTCAAGGACAGACAGGAGATAAAGGACCTAAGTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
597d4247a4ae43fca9dc400ad75a9e11168dab8d1d4100138cd7ba5321128801
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5956
Evidence 0,5956
Download PDB

Literature

No literature entries available.