Protein

View in Explore
Genbank accession
QBX32006.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MSFVDYCNLFGTLRFGAITVGINEVADQKRTIEWTGQDTNLKRLLSIANNFDAEIEFVTHLKNDSSLKSFVMNIYKKNDATHQGVGRRRDDIILQYGKNVESVRRKIDKTGIYNAIRPSGKTTVTTTTSKQGSVKTGSVLWSGGNLTYAGHVMQSSVVNTILSLCSKYKLLPSGVFSQLYLESFWGDTPVGRADNNWGGITWTGTTTRPSGIAVSQGQPRAEGGHYNHYASVDDYLKDYTYLLAEQGIYAVKGKLTIDEYTKGLFRVGGATYDYAAAGYDHYAPLMRDIRNGVNRNNNGAMDNVDNQFKNGGSTSQNTTQIAAKTKAVLAEANGLKGQRVGSGQCYALAAWYAMKLDGPGLNGGVTSFRGLIGAGAAAAQIGTDYNWAQFGWKSFAPSKVSDLAAGSIVNIRANSGAPVYTGGWGHTVIVKSLSGDMLTVLEQNFNNVQVVQEHTYSASAYLRTVQTVCYPPELVQGKRVGGTATEEPPRDETTAASEEKEVLINPSIYREWKNEAGQVEFYLKNSLLYAPLSKELYPSAFTGIETDDNWIRKDLDVDTESEEKLISVALADLKKHCYPAVTYEISGFVGDLDIGDTIKINDPEYTPSLILEARVSEQHISFTDPNQNKTVFDNYRALESKISQGLIDRMSELAEAAKPYDLRLVTDNGTVFTNGEGRSVLTAELWKGNTKFNATYQFKKDGTLIGAGLQLAVDAADIPDGKSLIITVEAYIGNELIASKQITFTDSTGEQGPAGRGIASTEDYYLASQDRTGVTSTTSGWTKTPQEITETNKYHWYYHVDIYSDGTRKETTPAIIGVYGDKGSDGKQGEKGDPGQIGPQGPAGALDEKQLQDLNNKIDGKADQGLTIEQINKLAELQAIATAELQAKASVDALASLQKQIQSAIDAMNANQKLSEQDLITASQRAIKAANDILDLKEQWNFIDNYMSASEEGFIIGSKDGTSSVRVAKDRIAFYSSGAEVASITGGMLKIDNGMFVATLQVGHFREEMYKVDGIDKHMNVTKYYDTIVG
Physico‐chemical
properties
protein length:1030 AA
molecular weight: 112280,02630 Da
isoelectric point:5,33902
aromaticity:0,08835
hydropathy:-0,39728

Domains

Domains [InterPro]
DC_0558
ATT
1–277
DC_0558 G3DSA:3.90.1720.60
IPR002901
ENZ
145–280
IPR002901 IPR007921
IPR002901
ENZ
162–273
IPR002901 IPR007921
G3DSA:1.10.530.10
RBD
164–268
G3DSA:1.10.530.10 DC_0921
G3DSA:2.10.70.40
Unmapped
187–230
G3DSA:2.10.70.40
QBX32006.1
1 1030
Architecture
ATT
STR
ATT 1-277 | STR 278-1030
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan90
[NCBI] 		2548313 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus canis
[NCBI] 		1329 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32006.1 [NCBI]
Genbank nucleotide accession
MK449010.1 [NCBI]
CDS location
range 26787 -> 29879
strand +
CDS
ATGTCCTTTGTTGACTATTGCAACTTGTTTGGGACTTTACGCTTTGGTGCGATTACCGTTGGCATTAATGAGGTTGCAGACCAAAAACGCACAATTGAATGGACTGGTCAAGATACTAATCTTAAACGGTTACTATCTATTGCTAATAATTTTGACGCTGAAATCGAGTTTGTGACACATCTTAAAAACGATTCTAGTCTTAAATCGTTTGTCATGAATATTTACAAAAAAAATGACGCAACACATCAAGGGGTTGGTCGCAGACGAGATGACATTATTTTGCAGTACGGCAAAAATGTCGAGAGTGTCAGACGTAAGATTGATAAAACAGGCATTTACAATGCTATCAGGCCAAGTGGAAAAACCACTGTCACAACGACTACAAGCAAACAAGGCTCCGTAAAAACGGGGTCTGTTTTATGGTCTGGTGGCAATTTGACTTATGCAGGTCATGTGATGCAATCATCTGTTGTTAACACCATTTTAAGTTTATGCAGTAAATACAAGTTATTACCGTCTGGTGTCTTTAGTCAGCTTTACCTTGAATCGTTTTGGGGAGATACCCCAGTCGGAAGAGCCGATAACAACTGGGGTGGCATTACTTGGACAGGTACAACAACCAGACCAAGCGGAATCGCTGTCTCACAAGGGCAACCTCGAGCCGAGGGTGGTCATTATAACCATTACGCAAGCGTTGATGACTACTTAAAAGACTATACTTACCTCTTGGCAGAGCAAGGCATTTATGCCGTAAAAGGTAAGCTAACCATTGATGAGTACACAAAAGGTCTGTTTAGGGTCGGTGGCGCAACATATGATTATGCTGCAGCTGGATATGATCATTATGCACCTTTGATGCGAGATATTCGGAATGGTGTTAACCGTAATAATAATGGCGCTATGGATAACGTCGATAACCAATTTAAAAATGGTGGCTCGACTAGTCAAAACACTACTCAGATAGCTGCTAAAACAAAAGCGGTACTTGCGGAAGCGAACGGCCTGAAAGGTCAGCGAGTGGGCTCCGGTCAGTGTTATGCCTTAGCTGCTTGGTACGCAATGAAATTAGATGGGCCAGGTCTAAATGGTGGTGTAACTAGTTTTAGAGGACTTATTGGTGCTGGTGCAGCAGCTGCTCAGATTGGTACGGACTACAACTGGGCTCAATTTGGTTGGAAGTCGTTTGCACCAAGCAAAGTCTCCGACTTGGCTGCTGGGTCTATCGTCAATATCAGAGCTAATTCTGGTGCTCCTGTTTACACAGGGGGCTGGGGGCATACTGTTATCGTTAAGTCATTGTCAGGCGACATGCTCACAGTCTTAGAGCAAAACTTTAATAACGTCCAAGTCGTCCAAGAACATACTTATAGTGCTAGCGCTTATTTAAGGACAGTCCAAACCGTATGTTATCCACCAGAATTGGTCCAAGGGAAACGTGTTGGCGGGACAGCAACCGAAGAGCCACCAAGAGACGAAACGACCGCAGCGAGTGAGGAAAAAGAGGTTTTAATTAACCCGTCGATTTACCGCGAGTGGAAAAACGAAGCTGGTCAAGTTGAATTTTACCTTAAAAACAGTTTGTTGTATGCGCCTTTATCTAAAGAGCTTTATCCATCAGCGTTTACAGGCATTGAGACGGACGACAACTGGATTCGCAAAGACTTAGATGTTGACACAGAGAGTGAGGAAAAACTTATCTCTGTTGCGCTTGCCGATCTAAAAAAACATTGCTATCCAGCTGTTACTTATGAGATATCTGGTTTTGTCGGCGATTTAGATATTGGTGACACCATCAAAATCAATGACCCAGAATACACACCAAGCCTCATTTTAGAGGCTAGGGTTAGTGAGCAACATATCTCATTTACAGACCCCAACCAAAACAAGACTGTCTTTGATAATTACAGAGCATTAGAGAGCAAAATCTCACAAGGGTTAATTGACCGTATGAGCGAGTTAGCGGAAGCTGCTAAACCATACGATTTGCGGTTGGTCACTGACAATGGCACTGTTTTTACAAACGGCGAGGGACGCTCTGTTTTAACCGCAGAGCTTTGGAAAGGTAACACAAAATTTAACGCAACGTACCAATTTAAAAAAGATGGTACTTTGATTGGCGCTGGACTGCAATTAGCGGTTGATGCAGCAGATATACCAGACGGCAAATCTCTAATTATTACCGTTGAAGCCTATATTGGCAACGAATTAATTGCAAGTAAGCAGATTACATTTACCGATTCAACTGGCGAGCAAGGTCCTGCTGGACGAGGAATTGCCTCAACAGAGGATTATTACTTAGCGTCTCAAGATCGTACTGGGGTAACCTCTACGACATCTGGCTGGACTAAGACGCCACAGGAAATCACAGAAACCAATAAATATCATTGGTATTATCATGTTGATATTTACTCTGACGGCACTCGAAAAGAGACAACCCCAGCTATTATTGGTGTTTACGGGGATAAAGGCTCAGATGGTAAGCAAGGTGAGAAAGGGGATCCTGGTCAAATAGGTCCGCAAGGCCCTGCTGGAGCGCTTGATGAAAAGCAATTACAAGACCTCAACAATAAAATTGACGGTAAAGCAGACCAAGGTTTAACCATTGAGCAAATCAATAAATTGGCTGAGTTACAGGCTATTGCGACTGCCGAGTTACAAGCAAAAGCAAGCGTTGATGCGCTGGCTAGCTTACAAAAGCAGATACAGTCTGCAATTGATGCGATGAATGCCAACCAAAAGCTATCTGAGCAAGACCTTATCACAGCTAGCCAACGGGCCATTAAAGCAGCCAATGACATCTTAGATTTAAAAGAGCAGTGGAACTTTATTGACAATTACATGTCAGCGTCTGAAGAAGGCTTTATCATTGGCTCAAAGGACGGTACAAGTTCCGTTCGTGTCGCTAAAGATCGCATCGCTTTTTATTCATCTGGCGCTGAGGTTGCTTCGATTACTGGCGGTATGCTTAAGATTGATAATGGTATGTTTGTAGCTACCTTGCAAGTTGGACATTTTCGCGAGGAGATGTACAAAGTGGATGGAATTGACAAGCATATGAATGTGACTAAATATTACGATACGATTGTGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b74f878a73fe76bdb507f1640807908c36b2bdaf0365b75c68d0ab048dd43e77
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7787
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank