Protein

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Genbank accession
AZB66870.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKQKLENFNADAIDVATPSKNGLMSAQDKTKLDSLKQFNPDTLTNATTQKAGLMSAEDKRRLDELKTNSNAYDKGLSNATASSSVIAANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTEDDNYHYQYVPKYHVSAHSTTKIVHLIPTNSANEFCTKTVIVKDNVVTGTNDNHNRTTKANKVRLHEILEF
Physico‐chemical
properties
protein length:230 AA
molecular weight: 25632,27420 Da
isoelectric point:6,65746
aromaticity:0,05652
hydropathy:-0,68435

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus pseudintermedius
[NCBI] 		283734 No lineage information
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB66870.1 [NCBI]
Genbank nucleotide accession
MK075006.1 [NCBI]
CDS location
range 36604 -> 37296
strand +
CDS
ATGGCTGAAATTACTAAGGCAAGGACGTTAACATACGATGGCGAAGAGGTTTATGCTAGATCGCACATTGATGTTGTTGACGGTTTAGATAAATCAAAGTTATTAACTGACGAGCAAAAACAAAAACTAGAAAACTTTAATGCGGATGCAATTGATGTTGCAACGCCATCGAAAAATGGTTTGATGTCCGCGCAAGACAAAACTAAACTGGACAGCTTAAAACAGTTCAACCCTGATACACTCACAAATGCGACTACTCAAAAAGCGGGCTTAATGTCCGCTGAAGATAAGCGTCGCCTTGATGAGTTGAAAACAAATTCAAACGCTTACGATAAAGGGTTATCAAATGCAACTGCATCCAGTTCAGTTATTGCAGCAAACATCAACAAATGGCCAAACGCAACTCAAACTGTAAATTTAAGTAAAAAAGTGAGCGAATGCCAAAATGGCATTGTGTTGGTATGGCGTTCTGACACTGAAGATGATAACTACCATTATCAATATGTACCTAAGTATCACGTGTCGGCTCATAGTACAACAAAAATTGTGCATCTAATCCCTACAAATTCCGCGAATGAATTTTGTACAAAAACAGTCATAGTAAAAGATAATGTCGTTACTGGTACGAATGACAACCATAATAGGACAACCAAAGCAAACAAAGTACGCTTACATGAAATTTTAGAATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fb5dca4864f486b5b0b680e828897c0d6387f9201fd8f223052e2f1833c69046
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8362
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage of Staphylococcus pseudintermedius Wipf,J.R.K., Deutsch,D.R. and Fischetti,V.A. 2014-10 — GenBank