Protein

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Genbank accession
XHB24367.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,51
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGDFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMFTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEIQVRTSGNGFLVYDSIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNSTVKTINVTLPTDVAVGDTVTIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLGLAYIEDKASGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSSEVNQSTTASYLDNVIVTPKKLNERAATETRRGLAEIASNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLATDSEVRNGTPASSNIPTVVTPEALHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDAKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVPPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWTFSQDTVFNNNISVQNILYANGGEVKVSPTADTGNVHVRFQNRDGTERGIIYAETQTASAGNLKVRVKNGTGTTATSQTYTFGGNGTLNVPNEVSTKTLRSSGNAVVGGTVMVNDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVKKAGDTMTGNLNLSGSAIVITGSESWYVPTNETVLRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138499,23200 Da
isoelectric point:6,85679
aromaticity:0,07260
hydropathy:-0,33513

Domains

Domains [InterPro]
DC_1986
ATT
8–137
DC_1986 DC_1209
IPR048391
ATT
1127–1228
IPR048391
XHB24367.1
1 1281
Architecture
ATT
STR
ATT
STR
ATT 8-137 | STR 348-1126 | ATT 1127-1228 | STR 1229-1265 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB24367.1
1 1281
Domain Start End Length (AA) Confidence
N-terminal 1 844 844 0,8672
Central domain 845 1043 200 0,2451
C-terminal 1044 1281 237 0,6481
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-844
Central
845-1043
C-terminal
1044-1281

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpn529046-KEN25_1
[NCBI] 		3142664 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB24367.1 [NCBI]
Genbank nucleotide accession
PP723049 [NCBI]
CDS location
range 53054 -> 56899
strand +
CDS
ATGAGCGATTTACTGAAACAACATTTCCGTGCAACAAACGGTTTGGATGCCGGCGGAAATAAAGTTATAAATGTGGCACTAGCTGACCGCAACGTTAAAACCGACGGCGTCTCCGTCGAGTACGTTATTCAAGAAAACACTATCCAAAAATATGACCCTACTCGTGGGTATCTCACTGATTTTGCTGTGACTTATGGACGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCTGCTGGAGATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACCGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGTCAGTTCATCAACGTTGACTCTAACGCTGCAGGTAATGCTACGCTGTTGTTACCTTTAGCACCGGATGAAGGCGATACTATCGTAGTTCGTGATATTGGCGGGCGTCCTGGCTATAACGGAATCTTAATTAAAGCACAAGATACTGGTGCGTCTATCGTATTTGGTGAATCGCGTCTGCGTGAGGTAAGACTTACTCGTCCGTATTCGCAAATTATGTTTACGTTTAGTAATGGTGCATGGCGTGCAAGTTTAACCGATTTTGGCGATACTGCTAAAATGGTAGTTCCGAACGGGATTGTTCCAACCCAGGTACAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTCATTACTCTGCCGTTGTTTGCTAACTCAAACGATATCATCAATTTTACTGACCTTGATGGTACATCGCCGATTAACCACATGACTGTGCGTACGTTTGACCCAACTATCTCGATTGGGACTCCCGGACAAACGGAAATTCAAGTACGTACTTCAGGTAATGGGTTTTTGGTATATGACTCGATTGACAAAATCTGGCGTATTTTTGAAAATGATTTACGCACCCGAGTAAGAATAATTACTTCTGACGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAACAGTACCGTTAAAACGATTAACGTTACTTTGCCTACAGACGTAGCTGTTGGGGATACTGTCACAATCGCAATGAATTATATGCGTAAAGGACAGACTGTAGTAATTAAAGCTTCTGATGGTGATACCATCGCGAGTAATTTGAATTTACTGCAATTTCCAAAACGCTCAGAGTATCCACCTGATGCAGCATGGGTGCAATCAAGCTCGATTACCTTTAACGGAACTACATCGTATGTTCCTGTTCTTGGGCTTGCATATATTGAAGATAAAGCATCCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGAGTTGATGCTAAAGACAATACAACTAGAGCTCGATTAGGTGTTATTGCTCTTGCTACACAGGCTCAAGCTAATGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACGCCAGAGACATTAAATGGACGTCGTTCTACTGAAACCCAAACTGGTATAGCAAGAATTGCAACTTCTAGTGAAGTTAATCAGTCAACAACTGCTTCTTACTTGGATAATGTAATCGTTACTCCTAAAAAGCTTAACGAAAGAGCTGCTACTGAAACTCGTAGAGGTTTAGCTGAAATTGCGTCTAATGCTAAAATGGATGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTACTTTATCGTACTACATCGGATTCACGATTAGGTGTTATTCAGTTAGTAAAAACTGGTGGTGCTCCTAACACAACTGCTGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAACCAATCAGGAATAGTCTGGTTAGCAACTGATAGCGAAGTTAGAAACGGAACTCCGGCTTCTTCAAATATTCCTACAGTCGTTACACCAGAAGCTTTGCATAAAAAAGTTGCTACTGACGGAGCAATTGGATTAATCCAAATAGCTACACAAACTGAAGTTAATGCTGGCGGCGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAACTGGCACCGACGCCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACTGAAGGTGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAAGTTGATGCAGGCACATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAAACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTCAGGCTATCCACAGGCGATGGAACGTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTTACGTTGAAACATTACTTACCTCGTCTTGGTAAAGCCTATGACACTGGAATGCTAGGTGGTCAAACCCCAGACAAATATGCTCGTCGCGATATAGCACAGACTATTTCTGGAGCTTGGACATTTAGTCAGGATACTGTGTTTAATAACAACATTTCTGTCCAGAATATTTTATATGCTAATGGTGGTGAAGTAAAAGTTTCTCCAACTGCTGACACCGGAAACGTGCATGTTCGTTTTCAAAATAGAGACGGAACTGAACGCGGTATAATTTATGCAGAAACCCAAACAGCTTCAGCTGGAAATTTAAAAGTTCGTGTCAAAAACGGAACAGGAACTACTGCTACAAGCCAGACCTACACCTTTGGTGGAAACGGCACGCTGAATGTTCCTAATGAAGTATCAACTAAAACTCTGAGGTCTTCTGGAAATGCAGTAGTTGGCGGAACTGTTATGGTTAATGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCACGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTATGCAAGATTAGCTGATGGTCGTTATGTTAAGAAAGCTGGTGATACAATGACTGGCAATCTTAACTTAAGCGGTTCTGCTATCGTCATTACGGGTTCTGAATCATGGTATGTTCCAACGAATGAAACTGTACTGAGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAGCTAAAAGGTCTTCGCGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAACCCAAGCACTTTAGTAGTGACCGGATATGAAGAAAAAACTGCTGCTGGCGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAACACTTATCAGCTTTGGACACCTTATCCTCCAACAACCGAAACTGCTGATAAGCGTTTCGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTGTTCACGTCTGCTACTCCTCCAACCGCAGCTGATATCGGAGCTCCAAGCTCAGTATCAACTCAGGTTAAAACCCTTGAAGTTTTGGAATGGATTAAGCTTGGTCCAGTTAAAATCTGGCCAGACCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d51e445abce69c05a339cc45f8f1789541ed8be81818d24887934bcbea353bc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Five Klebsiella Phages That Belong to the Genus Jiaodavirus Burke,K.A., Peters,T.L., Kirillina,O.A., Urick,C.D., Mzhavia,N., Musila,L., Nikolich,M.P. and Filippov,A.A. 2024-12-12 — GenBank