Protein

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Genbank accession
WJJ54282.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MTITLSEVRGGFNTSTINSNFEKIEEALNSNVLSVKEGSNQMEQDLDMNSNRLINLPAPINPTEPLRLEDLKTLEGDVSGIVPTVIRHTGDGVTFDFDSGTKVVAGPFSTKVYLNGIRLFPEVDYTTIGTKVRFINYVPTSTDKVDIYSYAPLEVIGPVGPTGPQGQEGERGPSPQYEWEGTRIRFIQPDGTWGPYVDLVGEIGPVGPQGPQGNVGPQGDSVAIDAIGNFADRSTYDNSPAKFVFFAKDYVFGVTQAGELEVVSDGVTSQYTLPFEAAGPAEIVLYYGNSYQRIATYSVTNLTNLVLFNVPEAGVRIVARRQVVPNSVGALFIKLSNTSGDWSQPYPFGQGPQGIEGPQGPIGPVGPQGPRGPEGPQGQPGQTGPQGPIGPQGPEGPRGPMGPQGPEGDKGPQGDQGQRGSREWYIETTGTSWSQALIDAINPNPVIYDVGIQYNKSQGYSESRVYRGSGVWEQVELVQGFTIKVMNGVSATKLNIGSATALSSTTFGGTDTPLNQARSFSVRLGVISTPFATSAMVSLEDLQVLLYAFSPSFQPTVQMTWSIRVNGSVVYESSRRAFVTADNTTYYGFSGGTWAFTIPSPREGNTIEVFLNGYVTSPGTNFKLSRVTTTGSQFSVVSLKA
Physico‐chemical
properties
protein length:641 AA
molecular weight: 68636,58510 Da
isoelectric point:4,73755
aromaticity:0,09672
hydropathy:-0,29548

Domains

Domains [InterPro]
DC_0258
STR
1–281
DC_0258 IPR008160 DC_0898
IPR050149
Unmapped
159–421
IPR050149
DC_1279
STR
260–400
DC_1279
WJJ54282.1
1 641
Architecture
STR
RBD
STR 1-419 | RBD 422-641
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ54282.1
1 641
Domain Start End Length (AA) Confidence
N-terminal 1 486 486 0,9960
Central domain 487 630 145 0,0202
C-terminal 631 641 10 0,9948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-486
Central
487-630
C-terminal
631-641

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JPW
[NCBI] 		3046621 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ54282.1 [NCBI]
Genbank nucleotide accession
OR039881.1 [NCBI]
CDS location
range 11252 -> 13177
strand +
CDS
ATGACTATTACTCTTAGTGAAGTAAGAGGTGGCTTTAACACCTCCACAATCAACTCCAACTTTGAGAAGATTGAAGAAGCTCTAAACTCCAATGTTCTCTCGGTTAAGGAAGGTTCCAATCAAATGGAACAAGATTTGGATATGAACTCCAACCGTCTAATTAACCTACCTGCTCCAATCAACCCTACCGAACCTCTTCGACTGGAAGACCTTAAAACCTTAGAAGGTGACGTGTCTGGTATTGTTCCAACGGTGATTCGACACACTGGTGATGGAGTTACTTTTGACTTCGACAGTGGTACTAAGGTAGTTGCAGGTCCTTTCTCTACCAAAGTGTATCTAAACGGTATCCGTCTGTTTCCAGAAGTGGATTACACTACAATAGGCACAAAGGTACGGTTCATTAACTACGTTCCAACATCCACAGATAAGGTGGACATTTATTCGTATGCTCCACTTGAAGTAATAGGTCCGGTGGGTCCAACTGGCCCGCAAGGACAAGAGGGTGAGCGTGGCCCTTCTCCACAATATGAATGGGAAGGCACTCGTATTAGATTTATCCAACCAGACGGTACATGGGGTCCTTACGTAGACCTAGTGGGGGAGATTGGTCCTGTTGGCCCACAAGGTCCTCAAGGTAACGTTGGTCCTCAAGGTGACTCTGTTGCTATTGATGCTATTGGTAATTTTGCAGACCGTTCAACCTACGACAACTCCCCAGCTAAGTTTGTATTCTTTGCCAAAGATTATGTATTTGGTGTAACACAAGCAGGGGAATTGGAAGTAGTAAGTGATGGTGTAACCAGTCAATACACTCTACCTTTTGAGGCCGCTGGCCCTGCTGAGATTGTGTTGTACTATGGTAACTCTTACCAACGTATTGCTACTTACTCAGTAACTAACTTAACTAACCTAGTGTTATTTAATGTTCCAGAAGCTGGTGTTCGTATTGTTGCCCGTCGGCAAGTAGTTCCAAACTCTGTAGGTGCTTTGTTTATTAAATTGAGTAATACTAGTGGAGATTGGTCACAACCTTACCCATTCGGCCAAGGTCCACAGGGTATCGAGGGCCCACAAGGTCCAATCGGACCAGTAGGCCCCCAAGGGCCACGAGGACCAGAAGGTCCACAAGGACAACCGGGTCAAACAGGTCCACAAGGCCCTATTGGGCCACAAGGTCCAGAAGGCCCGCGAGGTCCAATGGGACCACAGGGTCCAGAGGGAGATAAGGGTCCACAAGGGGACCAAGGTCAACGTGGTTCTCGTGAGTGGTACATCGAAACAACAGGCACAAGTTGGAGCCAAGCGTTGATTGACGCTATTAACCCTAATCCAGTTATCTATGATGTTGGTATCCAGTATAACAAATCACAGGGGTATTCTGAGTCCAGAGTGTACCGTGGTTCTGGAGTATGGGAACAGGTAGAGTTGGTTCAGGGATTCACAATCAAGGTGATGAATGGTGTAAGTGCTACCAAGTTAAATATTGGGTCAGCCACTGCATTATCCAGTACTACATTTGGTGGAACAGATACTCCACTTAACCAAGCACGGTCATTCAGTGTTCGTCTAGGAGTGATTAGTACCCCGTTTGCGACTTCTGCAATGGTTAGTTTGGAAGATTTACAGGTTCTGTTGTATGCATTTAGCCCCTCATTCCAGCCTACTGTTCAAATGACTTGGAGTATTCGAGTAAATGGTTCCGTAGTGTATGAGTCTTCTAGACGTGCTTTTGTTACCGCAGATAACACAACTTATTATGGTTTTTCTGGAGGAACTTGGGCATTTACTATTCCTTCTCCTAGAGAGGGAAACACTATAGAAGTTTTCCTAAATGGGTATGTAACTTCTCCGGGAACTAACTTTAAGTTAAGCAGAGTAACTACAACTGGCTCCCAATTTAGTGTAGTATCTTTGAAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88e3c86cf383a8c9f94efb75dc5706ed6f9aa23105382dcfd2b6e07f78a40c7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6531
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50