Protein

View in Explore
Genbank accession
QYU43875.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLYFPRSLKPVVSKGYSMTRRNNVWSVDLAGGGVRQGRDTYYDVFPVSVTLITSAMGRQAFLSFLEKVDGGASSFWMAHDFGMGIEDYQVTITSTIAESTEDGINWTITFTATAEKSPFQDLENQCLINNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSDEGPAGYPPINLLASALDSRIVYEGPQVYYINRNGNLVRSAANEWPLTFIDGVAVGRVPPEGGSINYQIGGLGIGWVSSFNRIPLTSTEDSVYQGNLAGAVTPTTENNSHFLYAKSLGDSVIDVGETYTATVILKANGVQFIQVYWNAGSTGISSRYSNFDLINKAVSGTATSAFITEISDGWVLCSTTTIATGDGSSLSSISVASIPSMASTRLPSYASDGESSFSVASAQVEKNPFATSPIVTDASPSARQTASAKVVMSGAASIDITYSDGTVVNVPSVDDYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:472 AA
molecular weight: 50520,53700 Da
isoelectric point:4,44199
aromaticity:0,10805
hydropathy:-0,04343

Domains

Domains [InterPro]
DC_0353
STR
48–472
DC_0353
NF048003
Unmapped
260–416
NF048003
QYU43875.1
1 472
Architecture
STR
STR 48-472
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-phiEc4
[NCBI] 		2863833 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYU43875.1 [NCBI]
Genbank nucleotide accession
MZ576218.1 [NCBI]
CDS location
range 17386 -> 18804
strand +
CDS
ATGAGCGACTTATACTTTCCACGTAGCCTTAAGCCGGTGGTATCAAAAGGCTACTCAATGACCAGACGTAACAACGTCTGGAGTGTAGATTTAGCCGGTGGCGGGGTGCGTCAGGGCCGTGACACGTATTACGACGTGTTCCCTGTTAGCGTAACCCTGATTACATCCGCAATGGGGCGGCAGGCGTTTCTGTCGTTCCTCGAGAAAGTCGATGGTGGCGCGTCAAGTTTCTGGATGGCGCACGACTTCGGCATGGGTATTGAGGATTATCAGGTAACCATCACGTCCACTATAGCGGAGTCCACCGAAGACGGGATTAACTGGACAATTACCTTCACGGCAACCGCCGAGAAATCGCCGTTCCAGGACCTTGAGAACCAGTGTCTGATTAACAATCTGCCAGATTTGTATGGCTGTTATGGTGATTGCCTGGGCAGTTTCCTGAAAATATACGCGAACTATGAAACGACGTTCCCGCGTATCTGGAGTGACGAAGGCCCCGCCGGTTATCCGCCGATTAACCTTCTGGCGTCCGCGCTGGATAGCCGCATTGTTTATGAGGGGCCACAGGTTTACTACATCAACCGAAATGGCAATCTTGTGCGGTCAGCCGCCAATGAATGGCCTCTTACGTTTATCGATGGGGTTGCGGTTGGGCGTGTGCCGCCAGAAGGCGGTTCTATTAACTACCAGATAGGTGGATTAGGTATTGGGTGGGTAAGTAGTTTCAACCGTATACCCCTAACATCAACAGAGGACAGTGTATACCAAGGCAACCTGGCAGGCGCAGTCACCCCAACAACAGAAAATAACAGCCATTTCTTGTATGCCAAATCGCTAGGGGATTCAGTAATAGATGTTGGGGAAACATATACTGCTACGGTAATTCTTAAGGCGAATGGTGTCCAGTTTATTCAGGTTTATTGGAACGCAGGTAGCACAGGGATTTCATCGCGCTACTCTAACTTCGACCTTATTAATAAAGCTGTATCAGGCACGGCGACATCGGCTTTCATAACTGAAATATCCGATGGGTGGGTTCTATGCTCAACTACCACAATCGCGACGGGGGACGGTTCTTCGCTATCCTCCATATCGGTGGCAAGCATACCGTCTATGGCGTCTACCAGACTCCCGTCTTACGCATCGGATGGAGAATCTTCTTTTTCAGTTGCGTCCGCTCAGGTTGAAAAAAACCCATTCGCCACGTCACCAATAGTAACTGACGCATCACCATCCGCACGCCAAACGGCGTCAGCAAAGGTAGTAATGAGCGGAGCCGCAAGTATTGACATCACCTATTCCGACGGCACTGTGGTAAACGTTCCGTCTGTAGATGATTACGCGACTATCCCTCAGGCCGATTCTGCGTGGGGTAGTAAATATATCACTCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
31443bbd426b890a03e994e245b5e4e5ed64e6c72ab97218ecd520897d0dea86
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8069
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two Escherichia phages belonging to the genus Kagunavirus Rodea Montealegre,G.E., Gonzalez-Villalobos,E., Balcazar,J.L. and Molina-Lopez,J. 2016 — GenBank