Protein

View in Explore
Genbank accession
WWQ72234.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MTITVDDVKLLKSQRLTDEDDGGGRATGQAVVDREINNLFPDISRLDRTIGRINLRKAFAGISSNSAEPYLGAHAIVTRAPADPRVSVLLFNTGSQTDERRDARNAIESFVVPAVSASFELLGNQLQGQRAIACVQREEQRLPEIGEVYQLVFESRSQYVRITDVEARLEQFAHDYGNGNFVNFTRRRLDLSISAPLGATFPGGQVTPGGTTSPKSQVLSTQVADAARYYGISPLAEAVSRGALSLRVKSVYSQLVPSTTRENALVDQLAGYQRRLFAAAGPARTVNLNVANIGSGRSRTFLGTGCAPGSLSLSAGGGVFADDRKGGLRYISGSNWIASGTVDYESGAIEMAASGSGWSGTASATYQPAAAATGEAVTGEIPIELGNRGFVYTLSLSEAPPQPGTLVVSFLALGKWQEIRDQGNGELAGEGTGTVDFATGSVSITLSALPDVGSSLIYAYVGQNDAALTQRTGTSVQARARINRTLPHQGLLPGSYKATFKVGGVERTVLDSGNGSLSGTGGSGQINYADGKVSMELSATPDAGSGIVHTYQQGSVTDSPLAVTSDSTGMCIGTLPGAPLKAGSVRLSWITKRRQAAPTLGADMGTGALPIFESEITVDNSVTDDAAGGWAGRAGTINYETGEFSLKVAGNYVFKEYTYYTDTVDNFGMKKLRLVATDTTLLEGFGGTLNVRAQSRGVEYGEQTDSQTVAPVTLDLLPGVAEPILPGSLVFTWAGEVYVDRSGVLYKNINSSTNAGIAVGSVDYAGRTATLNTYNSGAAPTVTLLACLTTNAGFSVTSMTFRTPGAPLRSASLQVTAVRLDTAQIVTTTADANGKLNGAVIKGSVDIVTGIVRLRFTSNLEDTTGASDIPVIPLLLRYNAVVFTSLPLDATLLGLDPVRLPADGRVPVFREGDVMVVAHTAETTVPSPQAGGVLQLGRDQQAEIKVVDANAVELASAGYSVDLERGRVTWANPLVLQDAEGNPLTLPLVVRDRVEHMTLCTEVQVNGELGISSPLPWDLPAGETLASSALSWGDLQARLHHWFTQRTWDIGSPNWTDEPKGDGTTANYNSLAYPPLIANRGAIDAKWALVFNSSTSFSVVEEKLGVIANGTTTTDTAPINPETNTPYFTIRKEGWGSGWAAGNAVRFNTDSCLGPMWIVRTVLSGKGTVEDDEFHLQIRGDAD
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 124729,97680 Da
isoelectric point:5,05091
aromaticity:0,06932
hydropathy:-0,10296

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWQ72234.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 650 650 0,8636
Central domain 651 873 224 0,2116
C-terminal 874 1183 309 0,2575
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-650
Central
651-873
C-terminal
874-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Turba
[NCBI] 		3097012 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ72234.1 [NCBI]
Genbank nucleotide accession
OR683412 [NCBI]
CDS location
range 30236 -> 33787
strand +
CDS
ATGACGATCACCGTCGATGATGTAAAGCTGCTGAAATCCCAGCGCCTCACCGATGAGGACGACGGCGGCGGCCGTGCCACCGGGCAGGCCGTGGTGGATCGCGAGATCAACAACCTGTTTCCCGATATCTCGCGCCTGGACCGGACCATCGGCCGGATCAACCTGCGCAAGGCCTTCGCCGGCATCAGCTCGAACAGCGCCGAGCCGTACCTGGGCGCTCATGCCATCGTCACGCGGGCGCCGGCCGATCCGCGTGTCTCGGTGCTGCTGTTCAACACCGGCAGCCAGACCGATGAGCGCCGCGACGCGCGCAACGCCATCGAGTCCTTCGTGGTGCCGGCCGTGTCTGCCTCGTTCGAACTGCTGGGCAACCAGTTGCAGGGCCAGCGCGCCATCGCTTGCGTGCAGCGCGAAGAACAGCGGCTGCCCGAGATCGGCGAGGTCTATCAGCTGGTGTTCGAGTCGCGCTCGCAGTATGTCCGCATCACCGACGTCGAGGCGCGGCTGGAACAGTTCGCCCACGACTACGGCAACGGCAACTTCGTGAACTTCACCCGGCGCCGGCTGGACCTGTCGATCAGCGCGCCGCTGGGCGCGACCTTCCCCGGCGGCCAGGTGACGCCAGGCGGCACCACCAGCCCGAAAAGCCAGGTGCTCAGCACCCAGGTCGCCGATGCCGCGCGGTACTACGGCATCAGCCCCCTGGCCGAGGCTGTCAGCCGCGGCGCGCTGAGCCTGCGGGTCAAGTCGGTCTATTCCCAACTGGTGCCCAGTACCACCCGGGAAAACGCGCTGGTCGACCAACTGGCCGGCTACCAGCGGCGCCTGTTCGCTGCGGCCGGGCCGGCGCGGACGGTCAACCTGAATGTCGCGAACATAGGCAGCGGCAGGTCGCGGACGTTCCTCGGCACCGGCTGCGCGCCGGGTTCGCTGTCGCTGAGCGCCGGCGGCGGTGTGTTCGCCGACGACCGCAAGGGAGGCCTGCGCTACATCAGCGGTTCGAACTGGATTGCCAGCGGTACCGTCGACTACGAGAGCGGCGCAATCGAGATGGCGGCCTCCGGCAGCGGCTGGAGCGGGACAGCGAGCGCCACCTACCAGCCTGCCGCCGCGGCGACGGGCGAAGCGGTGACCGGGGAGATCCCTATCGAACTGGGCAACCGCGGCTTCGTCTACACCCTGTCGCTGTCCGAAGCGCCGCCCCAGCCGGGCACCCTGGTGGTCTCGTTCCTCGCCCTGGGCAAATGGCAGGAGATCCGCGACCAGGGCAACGGCGAATTGGCCGGGGAAGGCACCGGCACGGTGGACTTCGCGACCGGCTCGGTATCCATCACCCTGAGCGCGCTGCCGGACGTGGGGAGTTCGCTGATCTACGCCTACGTCGGGCAGAACGATGCGGCGCTGACCCAGCGCACCGGCACCAGCGTGCAGGCGCGCGCGCGGATCAACCGGACGTTGCCGCACCAGGGGCTGTTGCCCGGCTCCTACAAGGCGACGTTCAAGGTCGGCGGGGTAGAGCGCACCGTGCTCGATAGCGGCAACGGCTCGCTCAGCGGTACCGGTGGCAGCGGCCAGATCAACTATGCCGACGGCAAGGTCAGCATGGAATTGAGCGCCACCCCGGATGCCGGGAGTGGGATCGTGCATACCTACCAGCAGGGCAGCGTGACCGACAGCCCGCTGGCGGTGACCTCCGACAGCACCGGCATGTGCATCGGCACTCTCCCCGGGGCGCCGCTCAAGGCGGGCAGCGTGCGCCTATCGTGGATCACCAAGCGTCGCCAGGCGGCACCGACCCTCGGTGCTGACATGGGCACCGGGGCGCTGCCGATCTTCGAATCGGAGATCACCGTGGACAACTCGGTGACCGACGACGCCGCCGGCGGCTGGGCCGGGCGCGCCGGGACGATCAACTACGAGACCGGCGAATTCAGCCTGAAGGTGGCCGGCAACTACGTGTTCAAGGAGTACACCTACTACACCGACACGGTCGACAACTTCGGCATGAAGAAGCTGCGCCTGGTGGCCACCGATACCACCTTGCTGGAGGGTTTCGGCGGCACGCTGAACGTGCGTGCGCAGAGCCGCGGCGTCGAGTACGGCGAGCAGACCGATTCGCAGACCGTCGCGCCGGTGACCCTGGACCTGTTGCCTGGTGTGGCCGAGCCGATCCTGCCGGGCTCGCTGGTGTTCACCTGGGCCGGCGAGGTCTACGTCGACCGCTCCGGTGTGCTGTACAAGAACATCAACAGCAGCACCAACGCCGGCATCGCCGTCGGCTCGGTGGACTACGCCGGCCGCACCGCGACGCTGAACACCTACAACTCGGGGGCGGCGCCGACGGTCACGCTGCTGGCCTGCCTGACCACCAACGCCGGTTTCAGCGTCACCAGCATGACCTTCCGCACGCCGGGGGCGCCGCTGCGTTCTGCGAGCCTGCAGGTGACGGCGGTTCGCCTGGATACCGCGCAGATCGTGACCACCACGGCGGACGCGAACGGCAAGCTCAATGGCGCGGTGATCAAGGGTAGCGTCGATATCGTGACCGGCATCGTCCGGCTGCGCTTCACCAGCAACCTGGAGGACACCACTGGGGCCAGCGATATCCCGGTGATTCCGCTGCTGCTGCGCTACAACGCGGTCGTCTTCACCTCGCTGCCGCTGGACGCCACCCTGCTGGGCCTGGACCCGGTGCGACTGCCGGCGGACGGGCGGGTGCCAGTGTTCCGCGAGGGCGACGTGATGGTGGTTGCCCATACCGCCGAGACCACGGTGCCGAGTCCTCAAGCTGGCGGCGTGCTGCAGCTCGGCCGCGACCAGCAGGCCGAGATCAAGGTGGTGGACGCCAACGCGGTGGAACTGGCCTCGGCGGGCTACAGCGTCGACCTGGAACGCGGCCGGGTGACATGGGCCAACCCGCTGGTCCTGCAGGATGCCGAGGGCAACCCGCTGACCCTACCGCTAGTGGTGCGCGACCGGGTCGAGCACATGACCCTCTGCACCGAGGTCCAAGTGAACGGCGAGTTGGGAATCTCCTCGCCGCTGCCCTGGGATCTGCCGGCGGGCGAAACGCTGGCGTCCAGTGCGCTGAGCTGGGGCGACCTGCAGGCGCGGCTGCACCACTGGTTCACCCAGCGGACCTGGGATATCGGCTCGCCGAACTGGACCGACGAGCCCAAGGGCGACGGGACCACCGCTAACTACAACAGCCTCGCCTATCCGCCGCTGATCGCCAACCGCGGTGCGATCGATGCGAAGTGGGCGCTGGTGTTCAACTCCTCGACCAGTTTCAGCGTGGTGGAGGAGAAGCTGGGGGTGATCGCCAACGGCACTACCACCACCGATACGGCGCCGATCAACCCGGAGACGAACACGCCGTACTTCACCATCCGCAAGGAGGGCTGGGGCAGTGGCTGGGCGGCCGGCAACGCGGTGCGCTTTAACACCGACTCGTGCCTGGGGCCGATGTGGATCGTGCGGACGGTGCTGAGTGGCAAGGGCACCGTCGAGGACGATGAATTCCACCTACAGATCAGAGGAGACGCGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
531330341dea11638788ae397a8414b7cf089b14b83ff507221c2c94eb073e32
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank