Protein

View in Explore
Genbank accession
XNO95577.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MRQILPSAKAYLANNDKIRLAYLVSIELPGSTGNNAVYAYMTDYMRDISYGGILFQSGKIKTISSHKQNRTLTVGSLSFSVTGTDANEVIKLVQSGVSFLDRSISIYQAIIDDNGEILPVDPDTNGPLLFFRGKIVGGGIKESNTVSGVGTSVITWNCSNEFYDFERVAGRFTDDASHRGLEIVNGELLPSHGAKRPEYQEDYGFFHANKSVNFLAKYQVKEERYKLESKKKLFGLSKSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGTQKVPGIPVFADTERNNPNVVYVVYAFCEGEIEGFLDFQFGDAPMICTDQTDSTSRTCFGQKRVSGDTMARISTGLPSTSLSEHGQEYKYNDGNGDIRIWTFHGKPDQTVATVLRDIAAANNFFLQGENGNGPEYWDSRYKLLDTAYAVIRFTITENRTDIPEVSAELSGRKVKVYQADGSVKMDKTSQNGVWQTFDYLTSTTFGASIPIDRMVIGDWRKEADLLNIVDTSYQTSWQPFWRYVGWESWTAENRQIMQMNTILDNSNSVFKNVQELLESFQGALNNLSGIFRITVEKDSKTPLELNFLDTYGDLELSDTTGRNKYNSVQASLIDPTLNWKTNSITFYNSKFKNEDRGVDKKLQLSFANITNYYTARSLADRELKKSRYSRSLSFSLPYKFLGIEPNDPVVFTYDRYGWNKKFFLVDEVENTRDGKINVTLQEYGEDVFINSTQVDNSSESVPEISNNVLPPRDFKYTPTPGGRVGDVGKNGELSWLPSLTPNVVYYSIRKSDRVDPYIVQQTAFTPNARMFQDIVGEPAGLTIFEIRAVDINGRRSSPVTISVDLNSAKNLSVVENFRVLNLSPDPAEWVGPDLELGWDKLQEEDLISGIFYTLEIRDSTNKLLRSVKITSLYNYSYLLSYNKLDYKANNSNTLGIYRALQPRIQAEGPRGEKSVAWAYI
Physico‐chemical
properties
protein length:948 AA
molecular weight: 107003,64660 Da
isoelectric point:5,39376
aromaticity:0,11603
hydropathy:-0,42954

Domains

Domains [InterPro]
DC_0187
STR
232–932
DC_0187
IPR032876
ATT
593–696
IPR032876
XNO95577.1
1 948
Architecture
STR
ATT
STR
STR 232-592 | ATT 593-696 | STR 697-932 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO95577.1
1 948
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9391
Central domain 313 541 230 0,4177
C-terminal 542 948 406 0,0030
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-541
C-terminal
542-948

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth37
[NCBI] 		3384123 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO95577.1 [NCBI]
Genbank nucleotide accession
PQ657803.1 [NCBI]
CDS location
range 87253 -> 90099
strand -
CDS
ATGAGACAGATCCTTCCTTCTGCGAAAGCCTACCTTGCCAACAATGACAAGATACGATTAGCGTATCTTGTCTCTATCGAACTCCCGGGGTCCACGGGTAATAATGCTGTTTACGCTTATATGACGGACTACATGAGAGATATCAGCTACGGTGGTATACTCTTCCAATCAGGGAAAATTAAAACAATTAGCAGTCACAAACAAAACCGCACGTTAACCGTCGGTAGTTTGAGCTTCAGTGTTACTGGTACGGATGCCAATGAAGTCATTAAGCTCGTGCAAAGTGGTGTATCATTTTTAGATCGCTCTATTTCTATATATCAGGCGATCATCGACGACAATGGGGAAATCCTTCCAGTGGACCCAGATACTAACGGCCCGTTACTCTTCTTTAGGGGTAAGATTGTGGGCGGTGGTATTAAAGAAAGTAATACAGTATCCGGAGTTGGTACTTCTGTTATAACTTGGAACTGTTCTAACGAATTCTACGATTTTGAACGAGTTGCTGGACGCTTCACAGACGACGCCTCCCACCGAGGGCTTGAGATTGTAAATGGGGAACTACTACCCTCTCACGGTGCCAAACGACCGGAATATCAAGAGGACTACGGATTCTTCCATGCCAACAAGAGCGTTAACTTCCTAGCTAAATATCAAGTAAAAGAAGAACGATACAAGCTAGAATCTAAGAAGAAATTATTTGGTCTCTCCAAGAGCTACAGCCTTAAAAAGTATTATGAGACTGTCACTAAAGAAGTAGACCTGGATTTCAACCTTGCAGCTAAATTTATTCCTGTAGTATACGGTACTCAAAAAGTTCCTGGTATCCCGGTTTTCGCGGATACAGAAAGAAACAATCCAAACGTTGTGTATGTGGTCTACGCGTTCTGTGAGGGTGAGATTGAAGGATTCCTCGACTTCCAGTTTGGAGACGCTCCTATGATCTGTACTGATCAAACTGACAGTACCTCTCGTACATGCTTTGGACAAAAAAGAGTATCGGGAGATACTATGGCAAGAATCTCCACAGGACTTCCATCAACATCTCTCTCAGAGCATGGTCAAGAATACAAGTACAATGACGGTAACGGGGATATACGAATCTGGACATTCCACGGTAAGCCAGACCAGACGGTAGCTACGGTACTAAGAGACATTGCTGCTGCTAACAATTTCTTCCTACAGGGAGAGAACGGTAATGGACCGGAGTACTGGGATTCTAGATACAAGCTATTAGATACTGCTTACGCTGTTATACGGTTTACTATTACCGAGAACAGGACCGATATTCCTGAAGTGTCCGCAGAATTAAGCGGCCGTAAGGTAAAAGTGTACCAGGCAGACGGTTCTGTTAAAATGGATAAAACCAGTCAGAATGGCGTATGGCAAACATTTGACTACCTAACCTCCACTACTTTTGGTGCAAGTATTCCTATAGATAGAATGGTGATTGGTGACTGGAGAAAAGAGGCCGATCTATTAAACATTGTAGACACCTCTTATCAAACTAGTTGGCAGCCGTTCTGGAGATACGTTGGGTGGGAGAGTTGGACAGCTGAAAACAGACAAATAATGCAAATGAACACAATCCTGGATAACTCCAACTCTGTGTTCAAGAACGTGCAGGAGCTATTAGAATCCTTCCAGGGGGCGTTAAACAACCTATCAGGTATTTTCCGCATTACCGTAGAGAAAGATTCAAAAACTCCGCTAGAACTTAATTTCCTAGATACTTATGGGGACCTGGAGCTCTCAGATACTACAGGTCGTAATAAGTACAACTCAGTTCAGGCGTCTCTGATTGATCCTACCCTGAACTGGAAAACCAACTCTATAACGTTCTATAATTCTAAGTTTAAGAATGAAGATCGTGGGGTTGACAAGAAACTTCAACTTTCTTTTGCTAACATAACCAACTACTACACTGCCAGAAGTCTGGCAGATAGGGAACTTAAAAAGTCTCGCTACTCGCGTTCTCTGAGCTTCTCTTTACCTTACAAATTCCTTGGTATAGAACCTAACGATCCTGTAGTATTCACCTACGATCGTTATGGCTGGAATAAGAAGTTCTTCCTAGTAGATGAGGTGGAGAACACAAGAGATGGTAAGATAAACGTAACTCTTCAGGAGTATGGTGAGGATGTATTTATTAACTCAACGCAGGTGGATAACAGTAGTGAAAGCGTACCTGAAATATCCAATAATGTCCTGCCTCCTAGAGACTTTAAGTACACTCCTACGCCTGGTGGAAGGGTGGGTGATGTTGGTAAAAACGGAGAGCTTTCATGGCTACCTAGCTTAACGCCTAACGTAGTTTATTACTCGATACGTAAATCAGACCGTGTGGATCCTTATATTGTGCAGCAGACTGCTTTCACTCCTAATGCTAGGATGTTCCAAGATATCGTGGGTGAGCCCGCTGGACTGACTATTTTCGAAATCCGCGCTGTTGATATTAATGGTCGTCGTAGCTCTCCAGTAACAATTTCTGTAGATTTGAATTCAGCTAAGAACCTTAGTGTGGTGGAAAACTTCCGGGTGCTTAACCTATCTCCTGATCCTGCGGAATGGGTTGGACCTGACCTAGAGCTAGGATGGGATAAGCTGCAAGAAGAGGATCTGATTTCAGGGATTTTCTACACGCTTGAAATAAGAGACAGCACTAATAAACTGCTTAGATCCGTGAAGATCACCAGTTTATATAATTACAGTTATCTGTTGAGTTACAATAAGCTCGACTATAAGGCCAACAACTCGAATACTTTGGGGATTTATAGAGCACTTCAGCCAAGAATTCAGGCAGAGGGACCAAGGGGCGAGAAGTCGGTTGCATGGGCATATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c5b97230ee4fefc5ac3a34bc46a34a897e0f41a7b35193c2cb905c263d99f05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank