Protein

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Genbank accession
XYM57504.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATYGTLKTMKAAAIGTIMPWGGDLTGIPAGWLICNGQTLEADDFPLLTQVIGDNYGGTSLGGTFPNYTGSIALPNINQRALVDLDSAYFDNSNTIDTTEALAALVDPVNGANFIGTDIDNGVGDDYDAYTDVNFAYTPESDFTGKLTGSNLNETFGSKTVYMSHRKLGRRHILIHSHPTTFDTMYLPSSGTRPGQGVAAWGEINYRISRASFDQLDYSQVQAQLSIQYTNDQGFGGGAAGVVIANVQGENPTFNLKPFNVVGSPISNWFGPYQVPNSTNSNTMDEEFQQGDTLAYTPGGGTQTIANRNFDPGGANSGDTQNWTKALFDSNAISFNQNTSIAGQQAVITPHNHEPFETTFDKANLRIPTTVNVTAISNVTPENIDKAFRLDVSVPTPNLLCLYLIRAY
Physico‐chemical
properties
protein length:408 AA
molecular weight: 43897,88020 Da
isoelectric point:4,47052
aromaticity:0,10049
hydropathy:-0,30025

Domains

Domains [InterPro]
IPR037053
ATT
6–77
IPR037053 DC_0344
SSF88874
STR
8–72
SSF88874
SSF88874
STR
8–85
SSF88874
IPR011083
ATT
16–71
IPR011083
XYM57504.1
1 408
Architecture
ATT
STR
ATT 6-77 | STR 78-408
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH1b
[NCBI] 		3413213 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57504.1 [NCBI]
Genbank nucleotide accession
PV340850.1 [NCBI]
CDS location
range 34589 -> 35815
strand +
CDS
ATGGCAACTTACGGAACACTTAAGACAATGAAAGCCGCCGCCATTGGCACCATCATGCCATGGGGCGGTGACTTGACAGGCATCCCAGCGGGATGGTTGATCTGCAACGGGCAGACATTAGAAGCAGATGATTTTCCATTACTTACACAAGTAATTGGAGATAACTATGGTGGTACAAGTTTAGGGGGAACATTTCCAAACTACACTGGATCGATTGCTCTCCCTAATATTAATCAGAGAGCACTAGTTGACCTTGACTCTGCATATTTTGACAACAGTAATACAATTGATACAACTGAAGCACTTGCTGCTCTAGTTGATCCAGTAAACGGAGCAAACTTTATCGGAACTGACATCGATAATGGTGTTGGTGACGACTATGATGCATATACTGATGTTAATTTTGCATACACACCAGAGAGTGACTTCACAGGAAAACTAACTGGTTCTAATTTGAACGAGACTTTCGGATCAAAGACAGTATACATGTCTCATCGAAAGTTAGGTAGAAGACATATTCTGATTCATAGTCACCCAACTACATTTGATACCATGTATCTTCCTTCTTCTGGAACAAGACCAGGACAGGGTGTTGCTGCATGGGGTGAGATTAACTATCGTATTTCTCGTGCTAGTTTTGACCAACTTGATTATTCTCAGGTTCAAGCACAGTTGAGCATTCAGTATACCAATGACCAAGGATTTGGTGGCGGTGCTGCTGGTGTTGTGATTGCTAATGTTCAGGGTGAGAACCCAACATTCAACTTGAAACCATTTAATGTTGTTGGATCTCCAATCTCTAACTGGTTTGGACCATATCAGGTTCCAAACTCTACTAATAGTAATACTATGGATGAAGAGTTTCAACAGGGAGATACCTTAGCATATACTCCTGGTGGTGGTACACAAACCATTGCAAATAGAAACTTTGACCCAGGTGGTGCCAACAGTGGTGATACTCAGAACTGGACTAAAGCATTGTTTGATAGTAATGCTATTAGTTTTAACCAGAATACATCAATTGCTGGTCAGCAGGCAGTTATTACGCCACATAATCATGAACCATTTGAGACTACCTTTGATAAAGCAAATTTGAGAATTCCTACCACTGTTAATGTAACTGCTATCTCAAATGTCACACCTGAGAACATCGACAAGGCATTTCGTCTAGATGTATCAGTTCCAACACCTAATCTACTCTGTTTATACTTAATTAGAGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dc9d7cd9fa7397bbde29b98d943dc750eb69f3092458a5a92c4cb6bb4e66d12
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5421
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50