Protein

Genbank accession
AHZ60138.1 [GenBank]
Protein name
IG-like virion protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTALGWEKTSLNQDPDEILTECKGLDALLTQSNLQADGVTKVDPTKPIGFEITYEIHDPSAVLTTGLAITPATAGGEVGQVVELLATVAPANATYQGVNWYSGDITKAVHIGGGKFKLLASGSVTVYGVTIEGGHTDSTVITVAGALALSTDLAASQDVTAGADATFTIAATGGTTPYTYAWYFSDVPGGAGAVIDAGANATAATASLVITAVDAADEGEYWCVVEDADGHSVTSARCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27460,30420 Da
isoelectric point:4,24152
aromaticity:0,05948
hydropathy:0,19368

Domains

Domains [InterPro]
G3DSA:2.60.40.1080
85–170
G3DSA:2.60.40.1080 IPR013783
IPR007110
164–260
IPR007110
IPR003599
180–269
IPR003599
IPR036179
181–261
IPR036179
PF13927
183–252
PF13927
cd00096
191–261
cd00096
AHZ60138.1
1 269
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage RC-2014
[NCBI] 		1477406 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Dickeya
[NCBI] 		204037 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHZ60138.1 [NCBI]
Genbank nucleotide accession
KJ716335 [NCBI]
CDS location
range 135015 -> 135824
strand +
CDS
ATGCCAACAATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACCGAGCGTCTGCACACTGTCACAGGCACTGCTCTGGGTTGGGAAAAGACCAGTCTTAACCAAGACCCAGACGAGATCCTGACTGAGTGTAAAGGTCTGGATGCACTGCTGACCCAGAGTAATCTGCAGGCGGACGGTGTGACCAAAGTTGATCCAACCAAGCCTATCGGCTTTGAGATCACCTACGAAATCCACGACCCAAGCGCTGTGCTGACAACTGGTCTGGCCATCACCCCTGCAACTGCAGGCGGCGAAGTCGGTCAGGTTGTTGAACTGCTGGCGACCGTCGCTCCGGCGAACGCGACCTATCAGGGCGTCAACTGGTACTCGGGTGACATTACCAAAGCCGTTCACATTGGCGGTGGCAAATTCAAGCTGCTGGCATCGGGTTCAGTGACCGTCTATGGTGTAACCATCGAAGGTGGTCACACTGACTCCACGGTCATCACAGTAGCGGGTGCGCTGGCTCTGTCTACTGATCTGGCCGCTTCTCAGGACGTGACAGCAGGCGCTGACGCAACCTTCACCATCGCTGCTACAGGCGGCACCACACCGTACACGTATGCTTGGTACTTCTCTGATGTCCCTGGCGGCGCTGGTGCGGTGATTGATGCAGGCGCTAATGCCACTGCAGCTACCGCAAGCCTGGTTATCACGGCAGTTGATGCCGCAGATGAGGGTGAGTACTGGTGTGTTGTTGAAGACGCCGACGGCCACTCTGTGACATCTGCTCGTTGCGAAATGGCTGTGGTCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b6bb416d0fc447195aa1fc36f3a14eb04c9e86a1de7e284f5c835e2d0a6a32c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7189
Evidence 0,7189
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of a broad-host-range lytic Dickeya spp. bacteriophage phiD5 Czajkowski,R., Ozymko,Z., Zwirowski,S. and Lojkowska,E. 2014 25000903 GenBank