Protein

View in Explore
Genbank accession
CBW38917.1 [GenBank]
Protein name
PblB-type protein
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MDALTRRQFDRAMFAKERTLAIRVGEYASRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHIEQVPEGKKLSFRDMLSAMTQVIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKSLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEFDKREKAITDAIELAKARAEEVKRELSDTINQRFNSFDNGPLKETKRKAEEALRNAGASTLLAQEAKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAEAEIALYPSGNPERNQGMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNATNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTGNFEAGSVTTTILGAEAVTAEKLKVDNALIRKLTANDAFIDQLISKRIFSIKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGHGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPKIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA
Physico‐chemical
properties
protein length:1468 AA
molecular weight: 164282,29300 Da
isoelectric point:8,51197
aromaticity:0,09332
hydropathy:-0,54462

Domains

Domains [InterPro]
DC_1421
STR
2–739
DC_1421 DC_0720
Coil
Unmapped
372–399
Coil IPR030392
IPR030392
CHP
1374–1467
IPR030392
DC_0976
RBD
1424–1468
DC_0976
CBW38917.1
1 1468
Architecture
STR
STR
RBD
STR 2-739 | STR 769-1435 | RBD 1436-1468
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage V22
[NCBI] 		870469 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBW38917.1 [NCBI]
Genbank nucleotide accession
FR671405 [NCBI]
CDS location
range 1558 -> 6125
strand -
CDS
ATGGACGCTTTAACTAGACGACAATTTGACAGAGCCATGTTTGCCAAGGAAAGGACGCTGGCTATTCGTGTTGGTGAATATGCTTCACGGGATATCAAAGAGGCTAGTTTTGAGTATGGCTACATCAAGGGCGATACTTATAAGCCTGGTGGAACCTGCGCTGGTAGCGGTAAAATTACCTTTACCAGTATCATTACCACGTTCAATAAGCTGGATACCCTGCACCCTGAGATTGGTCTACTGGTTGGGGATACCTACCAGTGGGTCAAGATGGGGGAATACTTCATCAACGATATTGAGATTGACCGAAACCGCAACACAACCACACTTGAACTTATGGACGGTATGTTTAAGCTCAATCGTGAGTACGTGACGGATTTGCATTTCCCAGCTGAAGTACGAGAGGTTATTCAGGAAATCTGCCTGAAAACAGGCATTGAGTTAGCGAATGACTATTTCGGAATCAGCGCGATGCGTTATCATATTGAGCAAGTTCCTGAGGGCAAGAAACTTTCCTTTAGGGATATGCTGAGCGCTATGACTCAGGTGATTGGGATGTCTTGTTTCTTCAACAGAGAAGGCAAGATGGAAATCCGTGATTTGACTGAGTCCAATATCACGATCAACGCTGACAGTTATTTCTTGCATGGCTTGACCAAGAGTGAGATTGAGTATCAGATAGCTGGTATCACTTGTAAGACGGACAAGAAGTCTCTGACGGTCGGTATGAAGACAGGTCGGTCTTTGGAACTGGACAATGTCTTCATGACCCAGAGCGCTTTAAATGACCTGTATTACAAACTGAAAAACCTAACTTACTATCCGTATAATCTCAACTACCAAGGGCATTTACTGCTTGAGGTTGGGCAGTGGGTAACCATTCAGACCAACAAGAAAGAAACCTTTAAAGTTCCTGTCTTAAGTCAGAGCTTTACTTTCAAAGGTGGTCTAAGAGGTCGTATCAGCGCAGATAGTAAAGCTGGAAATGATACGCAGTATTCTTACGAGGGTACGATTACCAAGCAGATTAAGCAACAAGATGGCATTGAAGCCAAAATCCAAGCGCAGATAGAAGCAGCAGACGCAGCCTTTGACGCTGAATTTGACAAACGTGAGAAAGCTATCACGGATGCCATCGAACTTGCCAAAGCCAGAGCTGAAGAAGTCAAGAGAGAACTGTCTGACACTATCAATCAGCGCTTTAATAGCTTTGACAACGGGCCATTGAAAGAAACTAAGCGCAAGGCTGAGGAAGCTTTGCGAAATGCTGGCGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGGGCTGGATTCTGTCGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCGGGTGACTTGGACGCTCTGAAACGGACTATCGCGAATGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGAATGAAGGTGGGAGGCCGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCTACTTTAACGTTCAACCTTGAACCAGATTTCAGCTCAAGGTTGTACCAAAAAGTTACTTTTAGCGCTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATCACTGAGGCTAAGGCTACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGATTTATCAGCTATTCAGGAATATGTAAATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAAAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTAGGCGGTCAAATCAGTGGCCTTTCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGTAATAAACAAGGCACAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCACGAAAAGTAGAGACTACTGACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGAATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTTGGGAAATATAGTGTAAGCGGCCCTAACCTCATTAAGAATAGTGATTTTAAAAATGCTACGAATGAATGGGGCTCAACTCAAAATTTAGGAAGATTGGTTAAGCATAGCTTTTATCACAACGGGCAGAAAGACCTTATGCGTTTAAGTAATGCAACTAAAAACGAAAACTTTTTGTATAGTCACCGTTTTAATCTTGAACGAAATACTGACTATGTACTGAATTTTAGAGGATTTAACAACAGTGCTCTCGCAAGCTATGATGTTTATATTTTGGGACGAAGAGCAGGCGAGAGCGATGGATTCACAATCGTTAAGAAAGTTGTTAGCAGCAAGAAACTATCTACCTCTAGATGCGAAGATGTCTCAGTAACTTTTAATTCCGGAGAAATGGATAATGCTTACATTCGTTTTGATAACAATGGCTCATCATCAGGAACAGCTGATTTGTATATTACAGAAGTTGACTTGTACAAAGGTTATAAACCTAGAACATGGCAACCACATCCAGAAGATGCAGTCGCAGATGCGAATAAGAAGCTTGAAGCCACGCAAACAAAAATGACTCAACTAGCTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGGCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGGCGCTGAAGCGGTAACTGCTGAGAAGTTGAAAGTTGACAATGCGCTTATTAGAAAATTAACTGCAAATGATGCTTTTATTGACCAACTGATATCTAAACGTATCTTCTCTATTAAGGTTGAGTCCGTCATTTCTAGCTCAACCTTCCTAGAAGCCTATCAAGGCCGAATCGGTGGATTCACACTTGGTCAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGCATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTCTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTACTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGATAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAAAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTGCATATTGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c60d3582eefb603cb2e8bfaf0db8876edd749509dc2adfae60295fef4b9f19a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7325
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid pneumococcal evolution in response to clinical interventions Croucher,N.J., Harris,S.R., Fraser,C., Quail,M.A., Burton,J., van der Linden,M., McGee,L., von Gottberg,A., Song,J.H., Ko,K.S., Pichon,B., Baker,S., Parry,C.M., Lambertsen,L.M., Shahinas,D., Pillai,D.R., Mitchell,T.J., Dougan,G., Tomasz,A., Klugman,K.P., Parkhill,J., Hanage,W.P. and Bentley,S.D. 6016 21273480 GenBank