Protein

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Genbank accession
QSL99457.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MSKARDLADFISTGSILSDGTIESTEISGVTADATEINKLDGLTADTTELNTLDGVTATTAELNKLAGTTATTSDFDKLSNVTASATELNYMTGATSSIQSQLDNISVTSGSLTKSFTNGESATITLAQSITPAPVVSVTKEVAQTGQSSKGAWDVNATASNYDLHNTAYDTTLTASTTTSLADSTYDSLSYTPGVGSNGLDFSPDGTKVYILRPGNNDVAQYGMSTAWAINTINTQYNFSVASQVTDEGGMCLSDDGYHLYVGDKVSPYPTNKIHQYTLTTAYDLSTASFTRTVDFSSTTTYSLGAIRVLDSGTKLYLFLGNGTNILVRQYTMSTAYDVSTATSDNKSFDFYADYGSGGYPRSSKITNDGLNLFLANGADDIVMHYTFSTAWDVTTLSRVGTYDPAEDANVSGTYVKEDLSKMYIYGGSNNKIFQYTLGSSDALTLGTGSFASTDVGKRIQGNGGDVILTSTAGAYDTTGGSDFTDTSTIASGSWTMHGIKSAGDDDGLTLVNKIVGYGDVDTYTNDNISYNYSAQISNLSSGMWFKPDGTAFYLIKATNDRVYRYNLSTAWDLTTASYNSDNAVPTSNGGTHTGISFSPDGTKMFVTNDGFDYLVQYNLSTAWDINSFSAYNAIDMSSSTYGSANNPAGMAWNNDGTKLFVTSQTSNKVVQLNFPTAYTLSGVSLGGTFSTTSQDTNPSGIAFNSDGTKMFVTTYNTDAIFQYSLSTAFDITTASYDNKTLSFASIDGNVRSVFFKDGGQKVYIQGRSNDTIFQFSSGSTTIPTSQYHLAVTNSGGQIDSVFWTDINSMTADQSLGDGEAYYAVSTDDRTTWSVAKGSDGVRPIVRDNAGTWQYNSDGGTTTYYDISSPTYVQGFNISGWSTDPYGICFKPDGTKVYIANDSGNRVNDFDLTTAWDISTITSTSHGGILATGGQETSPSGVQISSDGTKMYVIGYASDAIYQYTLTNAWDVYPSSYANKSLSVTGVGETIPSDIFFKPDGTRLFMVGKTTDKVFEYNLSTAWDLATATYSNNSFSVAGYDTGPQGLSFSSDGTKMFTVGINYVTEWSLSTAWDITTASYAREYDSSAQDTDPHGIAFKSDGSKMYIVGSSSDTIHEYNTSLSSYGTSTTWTNATTNDEFYALQQALGYNAFNRMDKTQLDAVADGSHFTLGNTLDLMIALKQDTASASLPTSDGVTINYDAEALNQGAVLGTDYDFDFPANNKVRITSNAAQNLKIRVV
Physico‐chemical
properties
protein length:1241 AA
molecular weight: 132699,68140 Da
isoelectric point:4,26431
aromaticity:0,11281
hydropathy:-0,30991

Domains

Domains [InterPro]
SSF75011
STR
194–442
SSF75011 IPR015943 IPR015943 DC_1851
IPR051200
Unmapped
536–796
IPR051200 SSF75011
SSF63825
STR
539–779
SSF63825
QSL99457.1
1 1241
Architecture
STR
STR
RBD
STR 194-442 | STR 522-1141 | RBD 1145-1241
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QSL99457.1
1 1241
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,7296
Central domain 148 358 212 0,7203
C-terminal 359 1241 882 0,1051
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-358
C-terminal
359-1241

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-9
[NCBI] 		2813174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSL99457.1 [NCBI]
Genbank nucleotide accession
MW514246 [NCBI]
CDS location
range 26044 -> 29769
strand -
CDS
ATGAGTAAAGCAAGAGATTTAGCAGACTTTATTTCCACGGGAAGTATACTCTCTGATGGAACTATTGAGTCTACTGAGATCAGTGGTGTTACTGCTGATGCTACAGAGATCAATAAACTTGATGGCTTGACTGCAGATACAACAGAGCTAAACACTTTGGATGGCGTTACAGCTACAACTGCTGAGTTAAACAAACTAGCAGGTACTACTGCTACAACATCTGACTTTGACAAGCTGTCTAACGTAACTGCTTCAGCTACTGAGTTGAACTATATGACTGGTGCTACTAGCTCTATTCAGTCGCAGCTAGACAACATCAGTGTTACATCAGGTAGTCTAACTAAGTCGTTCACTAATGGTGAGTCTGCTACTATTACTCTTGCTCAGAGCATTACTCCTGCACCTGTTGTGTCTGTCACAAAAGAAGTAGCACAAACTGGTCAGTCATCTAAGGGTGCTTGGGATGTAAATGCTACAGCGTCTAATTATGATCTGCATAACACTGCGTATGATACTACGTTGACTGCTTCGACTACTACAAGTCTTGCAGACTCTACGTATGATAGCTTAAGCTATACTCCAGGTGTAGGTAGTAATGGTTTAGACTTTTCTCCTGATGGAACAAAAGTGTATATTTTACGTCCAGGTAATAATGATGTTGCTCAGTATGGTATGAGTACAGCTTGGGCTATTAATACTATCAATACTCAATATAATTTTAGTGTAGCTAGTCAGGTAACTGATGAAGGTGGTATGTGTTTATCTGATGACGGTTATCATTTGTATGTAGGTGATAAAGTTTCACCCTATCCAACAAATAAAATACATCAGTATACCTTAACAACTGCTTATGATTTATCTACAGCCAGTTTTACTAGGACAGTAGACTTTTCAAGCACTACAACATATTCACTAGGTGCTATTCGTGTTCTTGATAGTGGAACTAAACTTTATCTATTTTTAGGTAATGGTACAAATATACTTGTTCGTCAGTATACAATGAGTACCGCTTATGATGTTAGTACTGCTACATCTGATAATAAATCTTTTGACTTTTATGCAGACTATGGCTCTGGTGGCTACCCTAGATCAAGTAAAATTACTAATGATGGTCTAAACCTATTTTTAGCTAATGGTGCAGACGATATAGTAATGCATTATACTTTCAGCACCGCATGGGATGTTACTACTCTATCGAGAGTAGGGACGTATGATCCAGCAGAAGATGCTAACGTTTCAGGTACTTATGTTAAAGAAGACCTATCTAAGATGTATATTTATGGTGGCTCAAACAATAAGATATTCCAGTACACTCTTGGCTCCTCAGATGCCCTAACCCTTGGTACAGGCTCCTTTGCATCAACAGACGTAGGCAAACGCATTCAAGGTAATGGCGGTGATGTAATCCTTACAAGCACTGCGGGTGCGTATGACACTACAGGTGGATCAGACTTTACTGACACTAGCACTATTGCGTCAGGCTCTTGGACTATGCACGGGATAAAGTCTGCTGGTGATGATGATGGTCTTACTTTGGTCAATAAGATTGTCGGTTATGGGGATGTAGACACCTATACTAACGACAATATAAGTTACAACTACTCCGCTCAAATATCTAACCTCAGTAGCGGCATGTGGTTTAAACCTGATGGAACTGCGTTTTATCTAATTAAAGCGACTAATGATCGTGTGTATAGGTATAATTTAAGTACAGCTTGGGATTTAACAACTGCAAGCTATAACTCAGACAATGCCGTACCAACTTCTAACGGTGGAACACACACGGGAATATCATTCAGCCCTGACGGAACAAAAATGTTTGTTACCAATGATGGGTTTGATTATCTTGTTCAATACAATCTTAGTACAGCTTGGGATATAAACAGTTTTAGTGCCTATAATGCGATTGATATGAGTTCATCAACTTATGGTTCTGCGAATAATCCAGCGGGAATGGCGTGGAATAATGATGGAACCAAACTATTTGTAACATCGCAAACAAGCAATAAAGTAGTTCAGTTAAATTTCCCTACAGCTTATACACTTTCTGGTGTAAGTCTTGGTGGGACTTTTAGTACTACAAGTCAGGACACAAATCCAAGCGGAATTGCTTTTAATTCTGACGGCACAAAGATGTTTGTAACAACATATAACACAGATGCTATTTTCCAATATAGCTTATCAACAGCTTTTGACATAACTACAGCATCCTACGATAACAAAACTCTTTCCTTTGCATCTATAGATGGAAATGTAAGAAGTGTATTCTTTAAGGACGGTGGGCAAAAAGTTTATATTCAGGGACGTTCTAATGACACAATTTTCCAGTTTAGCTCTGGCTCAACAACCATCCCAACATCCCAATACCACCTAGCCGTAACAAACTCTGGTGGACAAATAGACAGCGTATTCTGGACAGACATCAACAGCATGACAGCCGATCAGTCACTAGGTGATGGTGAGGCATACTATGCAGTCTCTACAGATGATCGCACTACATGGTCAGTCGCAAAGGGCAGCGATGGTGTTCGTCCTATTGTGAGAGATAATGCGGGTACTTGGCAGTATAATAGTGATGGTGGAACCACTACTTATTACGACATTTCTAGTCCAACATATGTTCAAGGTTTTAATATAAGCGGATGGAGTACTGATCCTTACGGTATATGTTTTAAGCCTGACGGAACGAAAGTGTACATTGCAAACGATTCAGGAAACAGAGTTAATGATTTTGATCTGACAACTGCTTGGGATATTTCTACTATTACTTCAACGTCACATGGCGGTATATTAGCAACAGGAGGCCAAGAAACTTCACCAAGCGGAGTTCAAATCAGCTCTGATGGGACAAAAATGTATGTGATTGGTTATGCTAGTGACGCAATATACCAATATACACTTACTAATGCTTGGGATGTTTATCCTTCATCTTATGCAAATAAGTCTTTAAGCGTCACTGGTGTAGGAGAAACTATTCCTAGTGATATTTTCTTTAAACCTGATGGGACAAGGCTGTTTATGGTAGGTAAAACCACAGACAAAGTGTTTGAATATAATTTAAGTACTGCTTGGGATTTAGCTACAGCTACCTATTCTAATAACTCCTTTAGTGTTGCAGGATATGATACAGGGCCACAAGGTCTGTCATTCAGTAGTGATGGCACTAAGATGTTCACTGTGGGAATTAACTATGTAACTGAATGGTCTTTGAGTACTGCATGGGATATTACTACAGCTTCTTATGCTAGAGAGTACGATTCAAGCGCACAAGACACTGATCCGCATGGTATAGCATTTAAATCAGATGGGTCTAAAATGTATATTGTTGGTAGTTCATCTGACACAATTCACGAATACAACACAAGTTTAAGCTCTTATGGAACTTCAACCACATGGACTAATGCCACAACTAACGATGAGTTTTACGCACTCCAGCAAGCATTAGGCTACAACGCATTCAACCGCATGGACAAGACGCAGCTAGACGCAGTAGCGGATGGTTCTCACTTCACGCTAGGCAATACGTTAGACTTGATGATTGCACTCAAGCAAGACACTGCATCAGCTTCACTGCCTACCTCAGACGGTGTAACAATTAACTACGATGCAGAGGCACTTAACCAAGGTGCGGTGCTAGGGACTGACTATGACTTTGACTTCCCAGCAAACAACAAGGTTCGCATTACTTCTAATGCTGCACAGAACCTGAAGATACGTGTAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d40f78ef6a0301ff0162738e28fb8830a1a0bb8ad04fb5a38d0583464235929c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6120
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two novel RCA phages reveals new insights into the diversity and evolution of marine viruses Zhao,Y. 2021 34668749 GenBank