Protein

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Genbank accession
QHR70536.1 [GenBank]
Protein name
tailspike colanidase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANSYNAYVANGSQTAFLVTFEQRVFTEIQVYLNSELQTEGYTYNSVTKQIIFDTAPLAGVIVRLQRYTTEVLLNKFGQDAAFTGQNLDENFEQILFKAEETQEAWLAPLDRAVRVPNSEVSINALPNVAGRRNKALGFDSNGQPFMIPLVDIPDSALAIALAMADGGKWIGTLGGGTFLDRQDTVCLSEFTNNTGYASVAAAVQACFDYAKANGKVVDARGWEGTVDSTVLMDGIEVVGGTWHGKADIRLLNSTFRNFVASTVRVAYWGGEVRIADYEFTSAPSNSKVTSILFQGNIAGGSYVIENGIHRNGKFGILQQGTGEAITNGVIRGITMMDMQGDGIEMNVINKHYDGGLLIENIFLENIDGTNAPIPLSNWGIGIGIAGQGPFGWDAAETQYAKNVTVRNVHAPRGVRQVVHFEVTRDSTCENVVANPDLSVSIGTGLTAAGVITYGCKRMTIDGVVGEPMNTGATSPNDIRIVMLEWGANQAGAGGTPGAACPSFDMTVRNVQTRTGRFYAGVGSDDDNTNTYHLENIHCYKMTLFGVATLLNMTNVTGVVFDAVGDDSSGGTSSNGLYPRKKTVLNMVNVNFYGPGMTEGALYSKARYSDISTLNSNVRAIPYTNIQGNVGVILSPVNRMYTLPNNLATLDGNEFPTGKEFCEGTVLFKTDGSGGNFIVTRFGAYIPDDGNNFKVRAAAAGQTYLEQNLTPAGTQASTSWLYHKPISAGTRLNIPGAGPSGGTLTVTVVRAPYQVDNNIGNPVRIDITPPLVTAIPAGTQLAATYPVAYI
Physico‐chemical
properties
protein length:790 AA
molecular weight: 84438,89530 Da
isoelectric point:5,05699
aromaticity:0,08861
hydropathy:-0,07899

Domains

Domains [InterPro]
DC_1548
STR
1–442
DC_1548 DC_0045
IPR011050
STR
200–373
IPR011050
QHR70536.1
1 790
Architecture
STR
RBD
STR 1-442 | RBD 484-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR70536.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9929
Central domain 199 692 495 0,9809
C-terminal 693 790 97 0,9795
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-692
C-terminal
693-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage megetsur
[NCBI] 		2696417 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR70536.1 [NCBI]
Genbank nucleotide accession
MN850608 [NCBI]
CDS location
range 33220 -> 35592
strand +
CDS
ATGGCGAACAGCTATAATGCTTACGTGGCGAACGGTTCACAGACCGCATTCCTCGTCACGTTCGAGCAGCGTGTGTTCACTGAGATTCAGGTGTACCTCAACTCCGAACTCCAAACGGAAGGGTACACCTACAACTCTGTGACCAAACAGATTATCTTTGACACCGCCCCGCTCGCCGGGGTGATTGTCAGACTCCAACGCTACACCACTGAGGTTCTGCTGAACAAGTTCGGCCAAGATGCTGCCTTCACCGGGCAGAACCTTGACGAGAACTTTGAGCAGATTCTGTTCAAGGCTGAGGAAACTCAGGAAGCATGGCTCGCGCCACTTGACCGCGCCGTCCGTGTTCCGAACTCCGAGGTCTCTATCAACGCACTACCGAACGTCGCTGGCCGCCGCAACAAGGCACTGGGCTTTGACAGCAATGGCCAGCCGTTCATGATTCCTCTGGTTGATATCCCGGACTCCGCTCTGGCGATTGCTCTGGCAATGGCTGACGGCGGTAAGTGGATTGGTACTCTCGGCGGCGGCACGTTCCTCGACCGACAGGATACCGTCTGCCTGTCCGAGTTCACCAACAACACGGGGTATGCCTCTGTCGCCGCTGCGGTACAGGCTTGCTTCGACTATGCGAAAGCCAACGGCAAGGTCGTTGACGCTCGCGGCTGGGAAGGTACGGTGGATTCCACTGTGCTGATGGACGGTATTGAGGTCGTCGGCGGTACGTGGCACGGCAAGGCTGACATTCGCCTGCTGAACTCCACCTTCCGCAACTTCGTGGCCTCTACTGTCCGTGTAGCCTACTGGGGCGGCGAGGTGCGTATTGCTGACTATGAGTTCACCAGCGCACCGAGCAACTCCAAGGTTACGTCTATCCTGTTCCAAGGCAACATCGCCGGGGGCAGCTACGTCATTGAGAACGGTATCCACCGCAATGGCAAGTTCGGTATTCTCCAACAGGGTACTGGCGAGGCTATCACCAACGGCGTTATCCGTGGCATCACCATGATGGATATGCAGGGTGATGGTATCGAGATGAACGTAATCAACAAGCACTATGATGGTGGCCTGCTGATTGAGAACATCTTCCTTGAGAACATCGACGGCACCAACGCGCCTATTCCACTGTCCAACTGGGGCATTGGTATCGGTATCGCTGGTCAAGGCCCGTTCGGTTGGGATGCTGCTGAGACGCAGTATGCGAAGAACGTCACTGTCCGTAACGTCCATGCTCCGCGTGGCGTGCGTCAGGTCGTCCACTTCGAGGTTACGCGTGACAGCACCTGTGAGAACGTAGTGGCTAACCCTGACCTGTCCGTCTCCATTGGCACTGGCCTGACTGCCGCTGGTGTAATCACGTACGGCTGCAAGCGCATGACCATTGACGGTGTAGTCGGTGAGCCTATGAACACCGGAGCAACCTCTCCGAACGATATTCGTATCGTGATGCTGGAGTGGGGTGCGAACCAAGCAGGCGCTGGCGGTACGCCGGGTGCGGCTTGTCCATCGTTCGACATGACCGTGCGTAATGTGCAGACCCGTACCGGGCGCTTCTATGCTGGTGTCGGCTCCGACGATGACAACACCAACACATATCACCTTGAAAACATTCACTGTTACAAGATGACGCTGTTTGGTGTGGCAACTCTGCTGAACATGACCAACGTGACTGGTGTGGTGTTTGACGCTGTAGGCGATGATTCCAGCGGCGGTACGTCCTCCAACGGTCTGTACCCGCGTAAGAAGACTGTTCTCAACATGGTGAACGTGAACTTCTACGGGCCGGGCATGACCGAGGGTGCGCTGTACAGTAAGGCTCGCTACTCGGATATCAGCACGCTGAACTCCAACGTGCGTGCTATCCCGTACACCAACATCCAAGGTAACGTGGGTGTCATCCTGTCTCCGGTCAACCGCATGTACACGCTGCCGAACAACCTCGCTACCCTTGACGGTAATGAGTTCCCTACCGGGAAAGAGTTCTGCGAAGGTACTGTGCTGTTCAAGACCGATGGCTCAGGTGGCAATTTCATCGTGACCCGGTTCGGTGCGTATATCCCGGATGACGGCAACAACTTCAAGGTGCGTGCTGCTGCCGCTGGCCAGACGTATCTGGAGCAGAACCTGACTCCGGCTGGTACTCAGGCGTCCACCTCGTGGCTGTACCATAAGCCAATCTCTGCTGGTACTCGACTCAACATTCCGGGTGCCGGGCCGAGCGGCGGTACGCTCACTGTGACGGTGGTGCGTGCCCCGTATCAGGTGGACAACAACATCGGAAACCCGGTACGCATCGACATTACACCACCCCTTGTGACGGCAATCCCTGCGGGAACGCAGCTCGCCGCTACCTACCCGGTGGCTTACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
72d2b65cfcb7467eda3df8111b498385c0d82f85adeb321844500c60bc81a7d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7094
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank