Protein

View in Explore
Genbank accession
WNV49954.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRIELTDYNSDPSTTIKIYRHYFPFDAEDLPPVLVELPGNTSSYTDETLILNTMVYYRISVVHNGNEVVGPLYTTMKRYYTGPQIDKNVPDRILRGDSYIGRYGTLPLNVILSIDEAKKLVPSCTVLEGIDHETIEVEKCSYHGNVLFISNIPVFYGSPEDLYNDGALLSYGDGLGVFSRTFYDSLTTKVEQGKPVTYNNYSFKFRLMTTSEYAELYVKLYPDSPMGLTCDRVIGNCNTHSYKSPVVDIGSQGNKFRTVGLDGVSSDTEWTTKGPLYMVVELMNRGDMAWPSPDVNIIPADPTDRMMFCQSEIINGRAHFFGGVYSHFNSYASATTKHISINLDGSDRQVHADMPVGVYNACTWVNGNKIYCMGGAKKIGSSEYTYAELYNDIQVWEDDGTPEGSWSTITNSLQFYYGASVTKYYDKITDRQRLLYIGGYGNVIPSGQYNFATADLDTFDGTFTVYNRSNFYDGGGGPIAPHEDYFLWVAPERSTNGFTNATYKLTIPEDTDSYTYRTKITQQGTELPTTKGGKIHIWRDTIFMYGSASLDEKQGELYLYQFVPNENRWLKITVAIPGLSNSSRASLNGAFYEDKLVLMHNQPWLNESFTSSFYVIRLIDPIDAPIIPVTDVQVGTSRIFTTYAEVSI
Physico‐chemical
properties
protein length:648 AA
molecular weight: 72916,83810 Da
isoelectric point:4,92558
aromaticity:0,12963
hydropathy:-0,32407

Domains

Domains [InterPro]
DC_1242
ATT
1–212
DC_1242 IPR015915
IPR015915
STR
299–599
IPR015915
DC_2226
RBD
563–648
DC_2226
WNV49954.1
1 648
Architecture
ATT
STR
RBD
ATT 1-212 | STR 280-620 | RBD 621-648
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV49954.1
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,8805
Central domain 71 325 256 0,7981
C-terminal 326 648 322 0,4498
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-325
C-terminal
326-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ANB1
[NCBI] 		3053653 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV49954.1 [NCBI]
Genbank nucleotide accession
OQ992561 [NCBI]
CDS location
range 221591 -> 223537
strand -
CDS
ATGAGAATTGAATTAACTGACTATAATTCAGATCCATCCACTACTATAAAGATATATCGACATTATTTCCCATTTGATGCAGAAGATTTGCCGCCCGTGTTAGTTGAATTACCTGGTAATACAAGTAGCTACACCGATGAGACTCTTATACTCAACACCATGGTTTATTACAGGATATCAGTCGTACATAATGGCAATGAAGTAGTTGGTCCTTTATACACAACAATGAAACGTTATTATACTGGACCACAAATTGATAAGAATGTCCCAGATAGAATCTTACGTGGTGATAGTTATATTGGCCGATATGGTACATTACCTTTGAACGTCATATTGTCAATAGATGAAGCTAAAAAATTAGTACCATCATGTACTGTACTTGAAGGAATCGATCATGAAACAATAGAGGTCGAGAAGTGTAGTTATCATGGGAACGTGTTATTTATTTCTAATATACCTGTTTTCTATGGTAGTCCTGAAGATCTTTATAATGATGGTGCTCTACTATCATACGGAGACGGATTAGGTGTATTCAGCCGCACATTTTACGATTCTTTAACAACTAAAGTTGAGCAAGGGAAACCTGTAACGTATAACAATTATTCATTTAAGTTCAGACTGATGACAACAAGCGAGTATGCTGAACTATATGTTAAGTTATATCCAGATTCCCCTATGGGTCTTACATGTGATCGAGTTATAGGTAATTGTAACACGCATTCATATAAATCACCAGTCGTAGATATCGGATCACAGGGTAATAAATTCAGAACAGTTGGATTAGATGGAGTGTCTTCAGACACAGAGTGGACTACTAAGGGACCACTTTATATGGTGGTCGAGTTAATGAATAGAGGTGATATGGCATGGCCAAGCCCTGATGTAAATATCATTCCTGCTGATCCAACTGATCGCATGATGTTCTGTCAATCTGAAATTATTAACGGACGTGCCCATTTCTTTGGTGGTGTTTATAGCCATTTTAATTCATATGCATCTGCCACTACTAAACATATCAGTATTAATTTGGATGGATCTGATAGGCAAGTACATGCGGATATGCCAGTTGGGGTATATAACGCATGTACTTGGGTTAACGGGAATAAAATCTACTGTATGGGCGGCGCCAAAAAGATAGGCAGTAGCGAATATACGTATGCTGAATTATACAATGACATTCAGGTATGGGAGGATGATGGTACGCCAGAAGGTTCTTGGTCAACTATAACGAATAGTTTACAATTTTATTATGGTGCTAGTGTTACGAAGTATTATGATAAAATCACTGATCGTCAAAGACTTTTATATATTGGCGGGTATGGTAATGTAATTCCTTCCGGACAGTATAATTTTGCAACAGCTGATCTGGATACATTTGACGGTACATTTACAGTCTATAATCGGTCTAATTTCTACGACGGTGGCGGCGGTCCAATAGCACCACATGAAGATTATTTCTTATGGGTTGCTCCAGAAAGAAGTACTAATGGTTTTACAAATGCGACATATAAATTAACTATACCTGAAGACACTGACTCGTATACATATAGAACCAAGATAACTCAACAAGGTACAGAATTACCAACCACCAAAGGTGGTAAAATTCATATTTGGCGAGATACTATCTTCATGTATGGCTCGGCATCTCTTGATGAGAAACAAGGTGAGTTATACTTATATCAATTTGTACCTAATGAAAACCGCTGGTTGAAAATAACCGTAGCGATACCAGGATTAAGTAATAGCAGTAGAGCATCTTTAAATGGAGCGTTTTACGAAGATAAGCTCGTGCTTATGCATAATCAACCTTGGCTTAATGAATCGTTTACATCAAGTTTCTATGTTATTCGATTAATCGATCCAATCGATGCACCAATCATCCCAGTCACAGATGTACAAGTTGGCACAAGTCGGATATTTACAACTTATGCTGAGGTTTCGATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c6ee46397799c30e277b40fbf848ae267e9985d2075be4a66e24782e23534fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7117
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo phages are active against extensively-drug-resistant eyedrop-associated Pseudomonas aeruginosa infections Cobian Guemes,A.G., Ghatbale,P., Blanc,A., Morgan,C., Garcia,A., Leonard,J., Huang,L., Kovalick,G., Proost,M., Chiu,M., Kuo,P., Oh,J., Karthikeyan,S., Knight,R., Pogliano,J., Schooley,R. and Pride,D. 2024-10-29 — GenBank