Protein

View in Explore
Genbank accession
YP_010673017.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MIVYNNQEPTNPNNVGQFGATEGSIGAYKQAAEYAADAKYWSLLAEAKFGTVDDLIAEVEKLYQQGILLREDIEALKQDFKDQDARLMQLIAQSNAAVANANNAIALINQKLVEVDKQLDILLGMTVEVTTLSPGQPATGEFDPTTGKISLGIPEGLPGKDGSVKDLNTVDTGVPVAGDLGFYVDQTDNTVHKTTLENIANLIPSVRDISVNGGPAESGSVSLTIDKSTVGLDNVENVASYSKEETDKKVDRFIKAYNTKADADADAINRKAGETILVWEDTKYSFYTVASDKILEPLKTEPRVVTVNSRIPDSTGNIDITIPTGNPSLYLGEMVMFPYDPAKNISYPGILPADGRLVSKESAADLGPSLLSGQLPVVSETEWQAGAKQYFSWGKQADGITDADSTNYVNIRLPDWTGGETIRSPNSATDTEYKGQVQAQKPYIVTVNGLSPNDNTGNVNLTPATIGAIAKAGGIMDGNLVLNNGISLRRIKDDSSQVNMVSRSGSDSSVFGDHLARTVIASSSVPYLSTPSGDYLFYAENNKPTPAAIGAAAVTTDGVNSDLKTFTQKATFQQPVTIPDAVGDYDAVTYRQLKNQGGGGGGATMNGISNFNIGDFRLVDSRAFIHSSDITSDGQLLTRADYPELWAYAQLLTPISDDDWLASPEKRGKYSLGDGSTTFRVPDRNGVQANSIAGLFGRGDSGNSGNDGAVFSSGAPNITGTPEVTMLSGWGSGGSVRGRGSFSPQTTTLTPIGGTNAINGSYVNIDFDASKSNPIYGRTVSELRPNNFIGVWVIRAKGAFIAANTSWSVINSDDIRPSDGTTITGGNLVSDYRVGTEPEGSAEFKMQGTVGGSYSARIGVYNKTSSKGTTFDFTEAGNIETPKGRVLVKDDYGVGVQGGTVLPDSNYNQFITDSDGNSPWAAANGGGFQTSYAVNRICQFWISLNGSAYVRTNTINNNPKELKTNLPWTTLQNAGTSDANVKDIGDDLDLNVALSNIKALEFKNFTYKSDEKKSPRRGVIAQQAEQVDPQYVHSAEKSGVMTLDTNPLLLDALAAIKCLSEKVEELEAKLAAK
Physico‐chemical
properties
protein length:1073 AA
molecular weight: 114277,28600 Da
isoelectric point:4,68566
aromaticity:0,07456
hydropathy:-0,35033

Domains

Domains [InterPro]
DC_0017
STR
24–442
DC_0017 DC_1514 IPR030392
Coil
Unmapped
73–93
Coil Coil SSF88874 IPR030392 Coil
DC_1877
STR
668–1073
DC_1877
YP_010673017.1
1 1073
Architecture
STR
STR
STR 24-442 | STR 537-1073
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EK010
[NCBI] 		2742112 Uroviricota > Caudoviricetes > Mktvariviridae > Suseptimavirus > Suseptimavirus EK010
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010673017.1 [NCBI]
Genbank nucleotide accession
NC_070981.1 [NCBI]
CDS location
range 64460 -> 67681
strand -
CDS
ATGATCGTTTATAACAACCAAGAGCCAACTAATCCTAACAACGTTGGTCAGTTTGGTGCAACAGAAGGCTCTATTGGAGCCTATAAGCAAGCAGCTGAATATGCTGCTGATGCTAAATATTGGTCACTATTGGCAGAGGCTAAATTTGGTACGGTTGATGATCTGATTGCAGAAGTGGAAAAACTTTATCAACAAGGGATTCTGTTACGTGAGGATATTGAAGCTCTTAAGCAAGACTTCAAAGATCAAGACGCTCGTTTGATGCAACTTATTGCTCAGTCTAATGCTGCCGTTGCTAATGCTAATAACGCTATTGCACTAATTAATCAAAAACTGGTAGAGGTTGACAAACAGCTGGATATCTTGTTAGGGATGACTGTTGAGGTAACAACTTTAAGTCCGGGACAGCCTGCTACTGGTGAGTTTGACCCTACCACTGGTAAGATCAGCCTTGGTATTCCTGAGGGTCTTCCGGGTAAAGATGGATCGGTTAAAGACTTAAACACTGTTGATACTGGTGTTCCTGTTGCTGGGGATTTGGGTTTTTACGTAGACCAAACTGATAATACAGTCCATAAAACCACTTTGGAAAACATCGCAAACCTAATCCCATCTGTTAGGGATATCAGTGTTAATGGTGGACCTGCTGAAAGTGGTAGCGTCTCTTTAACCATTGACAAAAGCACGGTAGGTCTAGATAACGTAGAAAACGTAGCTTCTTACAGTAAAGAAGAAACCGACAAGAAAGTTGACAGGTTCATCAAAGCCTATAATACTAAAGCTGATGCTGATGCTGATGCGATTAACCGAAAGGCTGGTGAGACAATTCTAGTTTGGGAAGATACTAAGTATTCATTCTACACCGTGGCTTCTGATAAAATCTTAGAGCCTTTGAAAACAGAACCTCGCGTTGTTACTGTTAACTCTAGAATCCCAGACTCCACTGGTAACATTGATATCACCATTCCTACAGGAAACCCTTCTCTGTATCTTGGTGAAATGGTAATGTTCCCCTATGACCCAGCTAAGAATATTTCATATCCCGGGATTCTTCCTGCTGATGGTCGTCTTGTTTCTAAAGAATCGGCAGCAGATTTGGGTCCATCTTTACTCAGTGGTCAGCTCCCTGTTGTCAGTGAAACAGAATGGCAAGCAGGTGCTAAGCAATACTTCTCTTGGGGTAAGCAAGCTGACGGTATTACTGATGCAGATTCTACTAACTATGTTAACATCCGACTCCCAGACTGGACTGGTGGTGAAACAATTCGATCTCCTAACTCGGCTACAGATACTGAATACAAAGGCCAAGTGCAAGCTCAGAAGCCTTATATTGTAACAGTTAATGGGTTATCCCCTAATGACAACACTGGTAATGTAAATCTCACCCCTGCAACAATTGGAGCTATTGCCAAAGCTGGTGGTATCATGGATGGTAACTTGGTTCTGAACAATGGAATCTCTTTAAGACGTATTAAAGATGACAGCAGTCAAGTCAACATGGTTTCTAGAAGTGGTTCAGATTCATCTGTGTTTGGTGATCACTTAGCCCGTACAGTTATTGCTAGTTCTAGTGTACCTTATCTGTCAACACCCTCTGGGGACTATTTGTTCTATGCAGAGAACAATAAGCCAACACCTGCTGCGATAGGTGCTGCTGCTGTAACTACTGACGGTGTAAACTCTGATCTTAAAACGTTTACACAGAAAGCTACTTTCCAGCAACCGGTTACTATTCCTGATGCTGTTGGTGATTATGATGCTGTTACCTATCGTCAGTTGAAAAACCAAGGTGGTGGCGGTGGTGGGGCTACAATGAATGGTATCTCCAACTTCAATATTGGCGACTTCCGACTAGTAGACAGTCGTGCTTTTATCCACTCAAGTGATATAACATCAGATGGTCAACTCCTTACCCGTGCTGATTATCCAGAGCTTTGGGCTTACGCCCAGCTATTAACCCCAATCAGTGATGACGATTGGTTAGCTTCTCCGGAAAAAAGAGGTAAATATTCTTTGGGTGACGGTTCTACAACTTTCCGTGTCCCTGACCGAAACGGGGTTCAGGCTAATTCCATAGCAGGGTTATTCGGGAGAGGTGATAGCGGTAACAGCGGTAATGATGGAGCTGTTTTTTCATCAGGAGCTCCTAATATAACAGGAACACCCGAGGTCACTATGCTGTCTGGTTGGGGTTCTGGTGGATCTGTTCGTGGTAGGGGTTCCTTCTCACCACAGACTACCACTTTAACTCCTATCGGCGGAACAAATGCCATAAATGGGTCTTATGTAAATATTGATTTTGATGCATCTAAATCCAACCCTATTTATGGCAGGACTGTATCAGAACTGAGACCTAACAACTTCATAGGCGTATGGGTAATTCGTGCTAAGGGTGCTTTCATTGCAGCTAATACTTCTTGGTCTGTTATTAATAGTGATGACATAAGACCGTCGGACGGTACAACCATTACAGGTGGCAACTTGGTATCCGATTATAGGGTTGGCACAGAACCAGAAGGGTCAGCTGAGTTCAAAATGCAAGGCACTGTTGGTGGTTCATACTCTGCAAGAATTGGAGTTTATAACAAAACTTCTTCGAAAGGTACAACTTTTGATTTCACTGAAGCGGGGAATATAGAGACTCCCAAAGGTCGTGTTTTAGTTAAAGATGATTATGGTGTTGGTGTTCAGGGTGGTACAGTGTTACCTGATTCTAACTATAACCAGTTCATAACAGACTCGGATGGTAATTCGCCGTGGGCAGCTGCAAATGGGGGAGGTTTCCAAACTTCTTATGCCGTAAACAGAATCTGCCAGTTTTGGATAAGCTTGAATGGTTCGGCTTATGTTAGAACTAACACCATAAACAATAATCCAAAAGAACTCAAAACCAACCTTCCGTGGACAACTCTTCAGAATGCTGGAACCTCTGACGCGAATGTTAAAGATATTGGTGATGATTTGGATTTAAATGTCGCTCTAAGTAATATTAAAGCTCTTGAGTTTAAGAACTTTACATATAAGAGTGATGAGAAGAAATCTCCACGTCGAGGGGTTATTGCACAACAGGCAGAACAGGTTGACCCTCAGTATGTTCATAGTGCGGAAAAAAGTGGAGTTATGACTCTCGACACTAACCCTCTTTTACTTGATGCTCTTGCAGCAATTAAGTGCTTGTCTGAGAAAGTGGAAGAGTTAGAAGCTAAGTTGGCTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f237e510bafbf264302bf675591ef14b3ce19c74d7a2dc6b1b05207a7b88fec7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the phage EK010 isolated from swine sewage Shahin,K., Bao,H., Soleimani-Delfan,A. and Wang,R. 2022-06-16 — GenBank