Protein

View in Explore
Genbank accession
QDU35677.1 [GenBank]
Protein name
tail tip protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MKKIIYFETPSHEPEIYDVESVEKWALEKFSKPIQGLRIFLNEISNENDISLRIFGEPELLEKDNNTYIFTVTPTGGVLDAVGKVITTVLNPILKILMPKQSTPTSAIANNRVNSSNNSMVNRTNEPRPGERIPDIVGYVRAYPDLLMDYKIFYDSQEYETQFLCLGRGEYQCEDIRDGITPLKNIAGSSLASYSKGNSPGNGQPDFIIGQQIDIEKFPIMIVKSSNEADGSELRPPNYNELKHFTLKVSKSGDVFTKAEDPIKWDERLNVGAVIKLSGVNSWEKHIIVDETTGTETVDYIRHNLSGDYEVLIIGDDYLKLNVESVTGWEFLSDDGEEPKKEAWKNPNTGRYLFSEQNGWNKETYEIGLKPIEEFVIGPYLMEDAPEIMVNLYCQNGLYKTDGTVYPFTTGIECELILTNPNNVNDVFRYPILVKGRMTDAVGATLRVKNPYPDAVNVSMRRIDNTDKGFNGSVIDTVKWRDLYAVTPLEPQNYGNVTLFQTVTKATVAALKLKERKLNLRATRICNGVAKRNFADVVIGMHTDPMIGRRKLDSLDVEELRRTEQQLLDYFGDKRSIECGFTFDQVSYTYEDGLQVIGDAVNCTPYQVGNMIYFWAELPQDKSAMQFGHPFKIPNTDKRTRNFSATKDYTGVQVKYFDHGSNTFEYVEKGEQTNMLKIDLKGCQSKYLANIRANREYNKLKLQRITHVFTANSIGLQASVGMRVDVVDNTRIKQNEGRIENIEGNILTLSEPLNLNDNYSYWMNINNRFGNLENIPIRVIDEWTVEMLEKPVSEIYTGWNRDKTSYVIHADDNLSSLAMLVTNVEPQARDNNYSVSITCSNYDNRYYKDDKGA
Physico‐chemical
properties
protein length:853 AA
molecular weight: 97107,36530 Da
isoelectric point:5,10456
aromaticity:0,09730
hydropathy:-0,50434

Domains

Domains [InterPro]
DC_0118
STR
1–712
DC_0118 DC_0808
NF040662
Unmapped
383–848
NF040662
QDU35677.1
1 853
Architecture
STR
RBD
STR 1-712 | RBD 713-853
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDU35677.1
1 853
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9627
Central domain 241 439 200 0,5418
C-terminal 440 853 413 0,1524
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-439
C-terminal
440-853

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage vB_PmiP_RS10pmA
[NCBI] 		2250311 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDU35677.1 [NCBI]
Genbank nucleotide accession
MG575420 [NCBI]
CDS location
range 26322 -> 28883
strand +
CDS
GTGAAAAAAATAATTTACTTTGAAACACCTAGTCATGAACCAGAAATATATGATGTTGAATCGGTTGAAAAATGGGCTTTAGAAAAGTTTTCAAAACCGATTCAAGGATTAAGAATATTCTTAAATGAAATTTCAAATGAGAATGATATTAGTTTAAGAATATTCGGAGAACCTGAATTATTAGAGAAAGATAATAACACCTACATATTCACTGTTACACCAACTGGAGGTGTTTTAGATGCTGTTGGTAAAGTGATTACAACAGTGTTGAACCCTATTTTAAAAATCTTAATGCCTAAGCAGAGCACTCCTACTTCTGCCATTGCTAATAACCGTGTTAATTCGTCTAATAACTCTATGGTTAATCGTACTAATGAACCAAGACCTGGTGAAAGAATTCCGGACATCGTAGGCTATGTCCGTGCTTATCCTGATTTGTTAATGGATTATAAGATATTTTATGATAGTCAAGAGTATGAAACACAATTTCTTTGTTTAGGGCGCGGTGAGTATCAGTGTGAAGATATCAGAGATGGTATTACACCTTTGAAAAATATTGCTGGATCTAGTTTAGCTTCTTATTCAAAAGGTAATTCACCTGGTAATGGTCAACCTGATTTCATAATTGGTCAGCAAATAGATATTGAAAAATTCCCGATCATGATAGTGAAATCAAGTAACGAAGCTGATGGTTCAGAACTGCGTCCACCTAACTATAATGAATTAAAACATTTTACACTTAAGGTTTCAAAATCCGGTGATGTGTTCACAAAAGCAGAAGATCCTATCAAATGGGATGAGCGATTAAATGTTGGAGCAGTAATAAAGTTATCAGGTGTTAACTCATGGGAAAAGCACATTATTGTAGATGAAACCACAGGTACCGAAACTGTTGATTATATCCGTCATAATTTATCGGGAGACTATGAAGTATTAATTATTGGTGATGATTACTTAAAATTAAATGTCGAGAGTGTGACAGGCTGGGAATTTCTATCTGATGACGGAGAAGAACCTAAAAAAGAAGCATGGAAGAATCCTAATACTGGTAGATATTTATTTTCAGAACAAAATGGATGGAATAAAGAAACGTATGAAATAGGTTTAAAACCTATTGAAGAGTTTGTAATAGGTCCTTATCTCATGGAAGATGCACCTGAAATAATGGTCAACCTATATTGTCAGAATGGGTTATATAAAACCGACGGCACTGTTTATCCGTTCACTACAGGTATCGAATGCGAGTTAATCTTAACTAATCCTAATAATGTGAATGACGTTTTTAGATACCCTATATTAGTCAAAGGAAGAATGACTGATGCAGTTGGGGCGACACTTAGAGTTAAGAATCCTTACCCAGATGCTGTTAACGTAAGTATGCGACGAATTGATAATACTGATAAAGGGTTTAATGGTTCTGTTATCGACACTGTTAAATGGCGAGATTTATACGCTGTTACACCACTTGAACCGCAGAATTACGGTAATGTGACATTGTTTCAAACAGTGACTAAAGCAACTGTTGCCGCTTTAAAACTTAAAGAAAGAAAATTAAATTTAAGAGCTACTAGAATTTGCAACGGGGTTGCTAAAAGAAATTTTGCAGATGTTGTGATTGGTATGCATACTGATCCAATGATAGGACGTAGAAAGTTAGATAGTTTAGACGTTGAAGAATTACGTCGAACAGAACAACAATTACTAGATTATTTCGGTGATAAACGTTCAATTGAATGCGGGTTTACTTTCGATCAGGTTTCGTACACATATGAAGACGGATTACAAGTTATTGGTGATGCTGTTAATTGTACACCTTATCAAGTTGGAAATATGATTTATTTTTGGGCTGAGTTACCACAAGATAAATCAGCTATGCAATTCGGACACCCTTTCAAAATACCAAACACAGATAAGAGAACTAGAAACTTTAGCGCGACTAAAGATTACACGGGAGTTCAAGTTAAGTATTTCGATCATGGGTCTAATACTTTCGAATACGTAGAGAAAGGGGAACAGACAAACATGTTAAAGATTGACTTGAAAGGGTGTCAATCTAAATATTTAGCTAACATAAGAGCCAACCGAGAATATAACAAACTCAAACTGCAACGTATTACTCATGTATTCACTGCTAACTCAATAGGTCTACAAGCCAGTGTCGGAATGCGTGTGGATGTTGTAGATAACACTCGAATTAAACAGAATGAGGGTAGAATTGAAAACATTGAAGGAAATATTTTAACTCTTTCAGAACCTTTAAATTTAAATGATAATTATTCTTACTGGATGAACATTAACAACCGTTTTGGTAATCTTGAAAATATACCTATTCGTGTAATAGACGAGTGGACAGTTGAAATGTTAGAGAAACCAGTAAGTGAAATTTACACTGGGTGGAATAGAGATAAAACAAGTTACGTGATACACGCTGATGATAATTTAAGTTCATTGGCAATGCTAGTCACTAACGTAGAACCACAAGCGAGAGATAATAATTATTCGGTGAGTATTACGTGTTCTAATTATGATAACAGGTACTATAAAGATGATAAAGGGGCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1e97b0e6813182b9a114cfc08a90d94fb0af6f87264fe445baca23a28044c5ed
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and ecogenomic characterisation of Proteus mirabilis bacteriophage to support development of cocktails for phage therapy Alves,D.R., Nzakizwanayo,J., Dedi,C., Olympiou,C., Hanin,A., Kot,W., Hansen,L., Gahan,C., Schellenberge,P., Ogilvie,L.A. and Jones,B.V. 2019-08-06 — GenBank