Protein

View in Explore
Genbank accession
WNO48669.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKQQPSVNLADNALNPYAKQKFVQVKTGQRISTVLREMGYLSGRGANAKRSHPFYVEVNGKPVLFEGWGYRIRASDTVNIVNLPKGGGGGSNPLQIVMMIVVVVAAVYTGGAVGAAYGAGYGAAAQAGVMVAGMALISLVTPTPSLGTNMGKQETSPTYSISAQGNAARLGQAIPVSYGQVNQFADYAAAPYTEVNGSEQYLYQLFLLTQGHTQIDQIFIENTPVEQFTGVQMQVVQPGEAVTLFPSNVYTVPEVNNNELVAPNLGGTMVGPFVAVPIGEKANALGFDISFPRGAFRMDNKGKQKSHNLSYMIEYQRLDDTTGNPVGPWVLVTNETVTFNTEQPQFRSYRVDVEPGRYQVRAIRLSSNEDNKQIGEIRWTNVRSYMPGSQRYGDCTLLAMIIKATNQINQNIQRRVRVKHTRRLRTWNPVDGWSASLTPTRNPAWALADMASNPIYGPGYGASKIDMFELYRLSQVWAQRGDNFDFVFDGQIQFWEALSVTARVGRAYPLMSAGMLSFVRTEPKTMPSFMFSPNNIVKDTFDVEYSFSDGVSTPDYVIAEYTNPETNQPETVDCILPGMRGERPGTLKLLGCTSRDQAWREGISLAAANRDQRKIINFTTERAGSIPRVGDLVRVSHDMPAWGYSGKVLGFNPTSDTIEIHDDKGNVIDTMLPFELRTTEDLPFLPGLQHSIAFQKRNGAPDGPHRAVIHPSGDRKKCIISTANPRSIYISDGVRQEMTGYQFGPDERRGLAAIVISAAPDEKGRVRMALTNYAESVHTAETGSAPLPGPDSNLPEANAAPIIDSVKFEPSAYSGEYFLRATPANGASYYEFQTSVNGTQWQSAGVSPDPYIKLYLSPGTYWGRVRAFGRAMGPWATTQQVLDGTVLPIPEIIAASATQNNFDTIVFSWVVDPDMEHAVSKFHVFYSTNDTDRESSVSVGSSGRSFTYHTTKFAAERWFWIQVEDTDGRLGQIKGPYYGKSTSDANFALDMLEGEIGQNQFVQALNEKIDRIDTLTGDVDGLWAGIEHERQERVNADSALASDILDVQAGVGDTMAAVQTVAQAQSDFQGKVAANYAIKVQVDANGNKYAAGMSLDVSESVGGDYQSTVAFVADRFVIMNAIGGSLQSPFMVVNGQVLIRQALIGEAWITNAHIQNAAITNAKIMDGQITAAKIGYAQINNTHIADAQITMAKIGVAQIDTLRLASGSVTTGQSFSFSIQVGRYSGTDAYAYAVWMPYGGTGMIFMNYSFVADWQNSKCYARCDSDGYVFLDSQMILTNEGKPDWYPNHRASYITATYGYGFNLQVTVWCQRPTNGYNYYSGRIAILGLQR
Physico‐chemical
properties
protein length:1331 AA
molecular weight: 145758,14380 Da
isoelectric point:5,72854
aromaticity:0,10143
hydropathy:-0,25980

Domains

Domains [InterPro]
DC_0129
STR
1–1114
DC_0129 G3DSA:2.160.10.20 DC_1302
NF040662
Unmapped
279–778
NF040662 IPR053171
IPR055385
ATT
280–385
IPR055385 IPR015406
WNO48669.1
1 1331
Architecture
STR
ATT
STR
RBD
RBD
STR 1-279 | ATT 280-385 | STR 386-1114 | RBD 1115-1229 | RBD 1231-1331
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO48669.1
1 1331
Domain Start End Length (AA) Confidence
N-terminal 1 642 642 0,7550
Central domain 643 1198 557 0,1075
C-terminal 1199 1331 132 0,9672
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-642
Central
643-1198
C-terminal
1199-1331

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage nyashin_LB6
[NCBI] 		3043592 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter sp.
[NCBI] 		134375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO48669.1 [NCBI]
Genbank nucleotide accession
OQ817840.1 [NCBI]
CDS location
range 17995 -> 21990
strand +
CDS
ATGAAACAGCAACCTAGCGTTAACCTCGCCGATAACGCGCTGAATCCGTATGCGAAGCAAAAGTTCGTTCAAGTAAAGACCGGACAACGCATCAGCACGGTGTTGCGCGAAATGGGCTATCTGTCCGGTCGCGGAGCGAACGCAAAGCGGTCGCACCCCTTCTATGTCGAAGTCAACGGTAAACCCGTCCTGTTCGAAGGATGGGGTTATCGCATTCGCGCATCGGATACCGTGAACATCGTGAACCTGCCGAAAGGCGGTGGCGGTGGCTCGAACCCCCTTCAAATCGTGATGATGATCGTCGTCGTAGTGGCGGCGGTCTACACTGGCGGCGCTGTGGGCGCTGCATACGGGGCGGGCTATGGCGCGGCTGCACAGGCTGGCGTTATGGTCGCTGGCATGGCGCTTATCTCGCTGGTGACGCCTACGCCGTCGCTCGGTACAAACATGGGCAAGCAAGAAACGTCCCCGACGTACAGCATCAGCGCCCAAGGCAACGCCGCACGCCTGGGTCAAGCGATCCCCGTATCGTACGGTCAAGTGAACCAATTCGCCGATTACGCGGCCGCACCCTACACCGAAGTGAACGGGTCCGAACAATACCTGTATCAGTTGTTCCTGTTGACGCAGGGCCACACGCAAATCGATCAAATCTTCATCGAAAACACTCCGGTCGAACAATTCACGGGCGTGCAAATGCAGGTCGTTCAGCCGGGCGAAGCTGTGACCCTGTTCCCTTCGAACGTGTACACGGTCCCCGAAGTGAACAACAACGAACTCGTCGCGCCGAATCTTGGCGGTACGATGGTCGGCCCGTTCGTCGCCGTGCCGATTGGCGAAAAAGCTAACGCATTGGGCTTCGACATTTCGTTCCCTCGCGGCGCGTTCCGCATGGACAACAAGGGTAAACAGAAGTCCCATAACCTGTCCTATATGATCGAGTATCAGCGCCTGGACGACACTACCGGAAACCCGGTCGGTCCCTGGGTATTGGTCACGAACGAAACCGTCACGTTCAACACGGAGCAACCGCAATTCAGGTCGTATCGCGTTGACGTGGAACCGGGCCGCTATCAGGTTCGTGCTATCCGCCTTTCTTCGAACGAAGACAACAAGCAAATCGGCGAAATCCGATGGACGAACGTTCGTTCATACATGCCCGGATCGCAACGCTATGGTGATTGCACGCTGCTGGCAATGATCATCAAAGCGACGAACCAAATCAACCAAAACATTCAACGTCGCGTGCGTGTGAAGCATACCCGCCGCCTGCGTACATGGAACCCGGTTGATGGATGGTCGGCCAGTCTGACGCCCACACGCAATCCCGCCTGGGCGCTCGCCGACATGGCGTCGAACCCGATCTATGGTCCGGGCTATGGTGCGTCGAAGATCGACATGTTCGAACTCTATCGCCTGTCGCAAGTATGGGCGCAACGCGGTGACAACTTCGACTTCGTGTTCGACGGGCAAATCCAGTTTTGGGAAGCCCTTAGCGTCACTGCCCGCGTAGGCCGTGCGTACCCGCTGATGAGCGCGGGCATGCTGTCGTTCGTCCGTACCGAACCCAAGACGATGCCGTCGTTCATGTTCTCGCCGAACAACATCGTCAAGGATACGTTCGACGTTGAATACTCGTTCAGCGACGGCGTGTCTACCCCCGACTACGTGATTGCAGAGTACACGAACCCCGAAACCAATCAACCCGAAACGGTCGATTGCATTCTCCCCGGGATGCGTGGCGAGCGACCCGGTACGCTAAAGCTGCTGGGATGTACGAGTCGTGATCAAGCATGGCGCGAAGGTATCTCGCTCGCAGCGGCGAACCGCGACCAGCGCAAGATCATCAACTTCACGACCGAACGCGCAGGGTCTATCCCCCGCGTAGGCGATTTGGTTCGCGTGTCGCACGACATGCCCGCATGGGGCTACAGCGGCAAGGTACTTGGCTTCAACCCGACTTCGGACACCATCGAAATTCACGACGACAAGGGTAACGTAATCGATACCATGTTGCCGTTCGAACTTCGCACTACCGAAGACTTGCCGTTCCTGCCGGGCTTGCAACACAGCATCGCATTTCAGAAGCGCAACGGCGCACCGGATGGGCCACATCGTGCCGTGATTCATCCCAGCGGCGACCGCAAGAAATGCATCATTTCCACCGCGAACCCCCGTTCGATTTACATCAGCGACGGCGTACGCCAGGAAATGACGGGCTACCAATTCGGACCCGACGAACGTCGCGGTTTGGCTGCTATCGTGATCAGCGCTGCACCCGATGAAAAGGGTCGCGTACGCATGGCACTCACGAACTACGCCGAATCGGTCCACACGGCCGAAACGGGTAGCGCTCCGTTGCCCGGTCCTGATTCGAACCTGCCCGAAGCTAACGCCGCGCCGATCATCGATTCGGTCAAGTTCGAACCGTCCGCATACAGCGGCGAATACTTCCTTCGTGCAACTCCGGCGAACGGTGCGTCCTACTACGAGTTCCAAACGTCGGTCAACGGCACGCAATGGCAATCGGCCGGAGTGTCACCCGATCCGTACATCAAACTGTACCTGTCTCCCGGCACGTACTGGGGCCGTGTGCGTGCGTTCGGTCGCGCAATGGGACCATGGGCCACAACGCAGCAAGTTTTGGACGGAACGGTTCTTCCGATCCCCGAAATCATCGCCGCAAGCGCAACGCAAAACAACTTCGATACTATCGTGTTTTCCTGGGTCGTTGACCCCGACATGGAACACGCCGTTTCGAAGTTCCATGTGTTCTACAGCACGAACGATACGGATCGCGAATCCTCGGTGTCGGTCGGTTCGAGTGGTCGAAGCTTCACGTACCACACGACTAAGTTCGCGGCCGAACGCTGGTTTTGGATTCAGGTTGAAGATACTGACGGACGGCTCGGTCAAATCAAGGGTCCGTACTACGGCAAATCGACCTCTGATGCAAACTTCGCACTCGACATGCTGGAAGGCGAAATCGGTCAGAATCAATTCGTACAGGCCCTGAACGAAAAGATCGACCGCATCGACACGCTGACCGGTGATGTTGATGGCCTGTGGGCGGGAATCGAACATGAACGCCAGGAACGCGTAAACGCCGATTCGGCACTTGCAAGCGATATCCTCGACGTGCAAGCGGGCGTCGGCGATACCATGGCCGCAGTCCAAACCGTGGCGCAAGCGCAATCCGACTTTCAAGGTAAGGTCGCAGCGAACTACGCGATCAAGGTGCAGGTTGATGCGAACGGCAACAAATACGCGGCGGGTATGTCCCTGGACGTGTCCGAAAGCGTAGGCGGGGATTATCAATCGACCGTCGCATTCGTCGCGGATCGCTTCGTCATCATGAACGCGATTGGCGGATCGCTGCAATCCCCGTTCATGGTCGTCAACGGACAAGTCCTTATCCGCCAAGCTTTGATCGGCGAAGCCTGGATCACGAACGCGCATATCCAAAACGCCGCGATCACGAACGCTAAGATCATGGACGGCCAAATCACCGCCGCGAAGATCGGATACGCGCAAATCAACAACACGCACATCGCCGACGCACAAATCACCATGGCGAAAATCGGTGTCGCACAAATCGACACGTTGCGGTTAGCGAGCGGTTCCGTAACGACGGGTCAATCGTTCAGCTTTAGCATTCAAGTTGGACGCTATAGCGGGACCGATGCCTACGCGTACGCCGTATGGATGCCATATGGCGGAACGGGTATGATCTTCATGAACTATTCGTTCGTCGCTGACTGGCAAAACTCGAAATGCTATGCGCGTTGCGATAGCGATGGGTACGTGTTTCTCGATTCGCAGATGATATTGACGAACGAAGGCAAGCCCGACTGGTATCCGAACCACCGCGCATCGTACATCACGGCCACGTACGGATATGGCTTCAACCTTCAAGTAACAGTATGGTGTCAACGGCCGACCAATGGGTACAATTACTACTCCGGTCGTATTGCCATACTAGGACTGCAACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a4eb6af6c3a1677ca4239f0f199f1bcc8ad90b8bfd2fdbe5637fe2699766c68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7228
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Compounding Achromophages for therapeutic applications Cobian-Guemes,A.G., Le,T., Rojas,M.I., Villela,H., McNair,K., Hung,S.-H., Han,L., Boling,L., Octavio,J.C., Dominguez,L., Cantu,V.A., Archdeacon,S., Vega,A.A., Jacobson,N., An,M., Hajama,H., Burkeen,G., Edwards,R.A., Conrad,D., Rohwer,F. and Segall,A.M. 2006 — GenBank