Protein

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Genbank accession
YP_009322156.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSFDSKKNVSGIRTVTAVAIYPNACRYSVPDIIDLGLCTSGEPAGSSYTGALIVSPDSGSDIGFYANSNPYMTTTSGEIIKVTIDSSTQVTITARGQLGTAASSISTSEPLRIMHGGEADGSCKGYPQLPDGSGCSTADSFDRTVERELLFPTSQNFNGQIYFNGLQSVTHTPVELKPGTAMAKNASVRVSILDNDDGDAYTVPYPSQRTTKATLFKKLLARHPYMQNRRLVTFSGFLDDDGNFDRDECIEREYIIDTMNLNNGTVSISCLDPLMLAEAKKAKYPETSNGRLAVAINDTSTQISLSSFGLNEYGSNGDSVTVNIEDELIDCTVNDATAGILDIVTRAVGGSEKKDHDIESSVQYVPVWENFNPVTKIIEVLQSTNIESRFYDDYTSAENAVVPNMGKVYIRKPEAVEDIIDEVIRSWSESGIALYFDEVAKKVRIKVSSDFGQQPLTLSDSGNIKQGSITVDNNYSEQVTRASIGFAPFNAGKKVDDENASIIYKGIDLITETTGTLEPLEDDEFYSRFLTNSDTDIQIAVAGTNRISQLNKRPPIIYTFDIDYKDYGQTDDGLVEEGEIINVTSTESVDDNGDPKSENLQIISLKENPSQNTYTVKAKLYQDIIVEADFDFVITESKEDYDLSADFAPTEPGEYTVFISSGVTIGATSANNPAMTTGAQANGVTLNIINRGSILGAGGRGADGVYAIATAPNDQPERTYIPGNDGYDGGNAIELTCPCTFDVTQGVVYSGGGGAPSTYSLADSTVTPVFVQAGNGGSGGQGYVGGLGGAAGSAQIDGLQVEYGEVGEDGSRSRAGTVGGLSAGAWGESSDSNIDSGNSALPGYAILSNGNNVIIVGDNSLTIKGRRDF
Physico‐chemical
properties
protein length:869 AA
molecular weight: 92543,74740 Da
isoelectric point:4,31467
aromaticity:0,07595
hydropathy:-0,30161

Domains

Domains [InterPro]
DC_2014
ATT
40–110
DC_2014 DC_1555 IPR007932
YP_009322156.1
1 869
Architecture
ATT
RBD
ATT 40-631 | RBD 632-858 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009322156.1
1 869
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,4262
Central domain 95 334 241 0,2139
C-terminal 335 869 534 0,1681
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-334
C-terminal
335-869

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage BS5
[NCBI] 		1874539 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas atlantica
[NCBI] 		288 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009322156.1 [NCBI]
Genbank nucleotide accession
NC_031917.1 [NCBI]
CDS location
range 16752 -> 19361
strand +
CDS
ATGAGCTTTGATAGCAAAAAGAATGTAAGCGGCATTAGGACGGTAACGGCGGTTGCTATTTACCCAAATGCCTGTCGCTACTCAGTGCCTGATATCATTGATTTAGGCTTATGCACTAGCGGCGAGCCAGCGGGCAGCTCATACACTGGTGCTTTGATAGTGTCGCCTGATAGCGGCTCAGATATAGGGTTTTATGCCAACTCTAATCCATACATGACCACAACCAGCGGTGAAATAATAAAGGTTACTATTGATAGCTCAACTCAAGTGACTATTACGGCGCGAGGTCAATTGGGTACTGCTGCTTCAAGTATCTCAACAAGTGAGCCGTTACGCATTATGCATGGCGGCGAGGCTGATGGTAGCTGTAAGGGTTACCCACAATTGCCCGATGGCAGCGGTTGCTCCACTGCTGATAGTTTTGATCGCACTGTTGAGCGTGAGTTGTTATTCCCAACATCGCAAAACTTTAACGGCCAGATTTATTTCAATGGATTGCAGTCTGTTACTCATACGCCTGTAGAGCTAAAGCCCGGCACTGCTATGGCTAAAAACGCTAGTGTGCGCGTATCAATTCTTGATAATGATGACGGTGACGCATACACAGTGCCATACCCTTCGCAGCGCACCACTAAGGCAACGTTATTTAAAAAGCTATTAGCTAGACACCCTTACATGCAAAATCGCCGCCTAGTTACGTTCAGTGGCTTTCTTGATGATGATGGAAACTTTGACCGCGATGAGTGTATCGAGCGCGAATATATAATCGACACGATGAATTTAAATAACGGTACAGTTTCAATTTCATGCCTTGACCCACTAATGCTAGCGGAAGCTAAAAAGGCAAAATACCCTGAAACATCAAATGGTCGCTTGGCCGTTGCCATTAATGATACTAGTACGCAAATATCTTTAAGTAGCTTTGGGCTTAATGAATATGGCTCTAATGGTGATTCTGTAACGGTAAATATTGAAGATGAGTTGATTGATTGTACTGTTAATGATGCCACTGCGGGTATTCTTGATATAGTTACCCGAGCCGTAGGTGGTAGTGAGAAAAAAGACCATGACATTGAATCATCTGTGCAATACGTGCCAGTGTGGGAGAATTTCAACCCAGTAACTAAAATAATTGAAGTGCTACAAAGTACCAATATAGAAAGCCGCTTTTATGATGATTATACATCTGCCGAAAACGCAGTGGTGCCAAACATGGGCAAGGTTTACATAAGAAAGCCCGAGGCGGTAGAGGATATTATTGACGAGGTTATCCGCTCATGGTCTGAAAGTGGTATTGCCCTTTACTTTGATGAGGTAGCAAAGAAAGTGCGTATCAAGGTATCTAGCGACTTCGGCCAGCAACCGTTAACACTTAGTGATAGTGGCAATATAAAGCAAGGCTCTATAACTGTAGACAACAATTACAGCGAGCAAGTAACACGCGCGTCAATTGGCTTTGCGCCTTTCAATGCTGGTAAAAAGGTTGATGATGAAAATGCATCGATTATTTACAAGGGCATTGATTTAATAACTGAAACCACTGGCACACTTGAGCCGCTTGAAGATGATGAGTTTTATTCTAGGTTTCTGACAAATAGTGATACGGACATACAAATTGCCGTTGCTGGTACGAATAGGATTTCTCAATTAAACAAGCGCCCACCAATCATATACACGTTTGATATTGATTATAAAGACTACGGCCAAACTGATGACGGACTGGTTGAGGAAGGTGAAATAATAAACGTTACCTCAACCGAAAGCGTTGACGATAACGGCGACCCTAAAAGTGAAAATCTGCAAATAATTTCATTGAAGGAAAACCCAAGCCAGAACACCTACACGGTTAAGGCTAAACTGTATCAGGATATTATTGTTGAAGCCGATTTTGATTTCGTGATAACCGAGAGTAAAGAGGATTACGATTTAAGCGCAGATTTTGCGCCAACTGAGCCAGGTGAGTATACGGTGTTTATTTCATCTGGCGTAACCATTGGCGCGACTTCTGCTAATAATCCAGCCATGACTACGGGCGCGCAAGCTAATGGAGTTACGTTAAATATAATAAACCGCGGATCGATACTTGGCGCTGGCGGGCGTGGTGCTGATGGGGTTTACGCTATTGCTACAGCTCCAAACGACCAGCCAGAAAGGACTTACATACCCGGTAACGATGGTTATGATGGCGGCAACGCAATTGAGCTTACATGCCCATGTACTTTTGATGTTACGCAAGGCGTTGTTTACTCTGGTGGCGGCGGCGCCCCTTCTACTTACTCGCTAGCAGATAGCACAGTAACACCTGTTTTTGTTCAGGCTGGTAATGGCGGTTCGGGTGGCCAAGGTTATGTTGGTGGTTTGGGTGGTGCGGCTGGCTCAGCTCAAATAGACGGCTTACAAGTTGAGTATGGCGAAGTTGGTGAAGATGGATCAAGGTCTAGGGCTGGCACAGTTGGCGGTCTATCTGCTGGCGCTTGGGGTGAGAGTTCAGACTCTAACATTGATTCAGGTAATTCGGCTTTACCTGGTTACGCGATACTATCAAACGGAAATAATGTTATTATTGTCGGTGACAATAGCTTAACAATTAAAGGGCGGAGAGATTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
06fdad710b8a478f40cccf6240a56ec2db6ff8f7ab082083f0f0b1797d017191
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7172
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Complete Genome Sequence of Bacteriophage PH14: A Novel Broad spectrum Siphoviridae which was isolated from Bohai Sea Meng,X. 2017-04-20 — GenBank