Protein

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Genbank accession
AUR83380.1 [GenBank]
Protein name
head-closure protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAMRGKQEMFTGARGLITETTATNFPADACTDLLNVDLGKDGSITTRFGLTDEKGGVITQSMRDQYNFVTSTPPFSQATDQVRQNYTWSNAGGVQGISIEVVRVGLQLFLFMHGDTISLTPLRVVDIEKEGTLLLRPTSALTTMMEFSSGNGRLYVASPDLEPFYVEIDAEFDEITVEKIDLQIRDLDGIDEGTESQSRPVTLTNEHDYNLRNQGWPYLNNVTAVQDREGGSTAQVKPINYTKQILNVYPSNSDLYYLCKAQSAEIPQAINAFSPYVLGDLQLGNTPAPKGHYIVDAFNIDRDLAGIEETFQRPRATAFYSGRAWWSGVQDNKLSSTVFFSQAGRDAKLSGRCYQVADPTSEEINDLVATDGGVITVQEMSAVIAMRTIGQFLVLFADNGVWSISGTDGSNFSAVDASVSKVSENGAISASSIIEHDGGLYYFGKSAIYRVVPDSDVAIQLTEQNLTEGTIKSFYLGIGGNALTTAKGVSSTRDGKIYWNFLEAGQEDRYNLNRQLILDTNTGAWTVYQYGYDPDIRVMGMVDTAELFLSTINDALVYDSNDDVVTESDDNTQVTVEGGSEISETEGAGSKIVSIVNVDGATGILYGELTSQTFTDWSTRSNLPYEHYFEMGFNAMGGNATKGSPVYVNSFFARDLGLTSDEETPVIPDLPERESVRLFNTYWQVLEKL
Physico‐chemical
properties
protein length:689 AA
molecular weight: 75572,93580 Da
isoelectric point:4,35901
aromaticity:0,09724
hydropathy:-0,25965

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR83380.1
1 689
Domain Start End Length (AA) Confidence
N-terminal 1 200 200 0,9412
Central domain 201 400 201 0,3193
C-terminal 401 689 288 0,0413
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-200
Central
201-400
C-terminal
401-689

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.034.O._10N.261.46.B7
[NCBI] 		1881189 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83380.1 [NCBI]
Genbank nucleotide accession
MG592418 [NCBI]
CDS location
range 11937 -> 14006
strand +
CDS
ATGGCAATGCGAGGAAAGCAAGAAATGTTCACAGGTGCGCGTGGTCTCATAACTGAGACTACCGCCACGAACTTCCCTGCCGATGCATGTACCGACTTGCTGAATGTTGACTTAGGAAAGGACGGCTCAATCACGACACGCTTCGGTCTAACCGATGAGAAGGGTGGTGTTATAACGCAGTCAATGCGTGACCAGTACAACTTCGTGACGAGCACTCCGCCATTTTCTCAGGCAACCGACCAAGTGCGACAGAACTATACGTGGTCTAATGCAGGTGGTGTGCAGGGCATTAGTATTGAGGTGGTGCGTGTCGGTCTGCAACTATTCCTATTCATGCACGGTGATACTATATCGCTGACACCACTACGTGTGGTGGACATAGAGAAGGAGGGTACTCTACTGCTACGGCCTACCAGTGCGCTGACCACCATGATGGAGTTCTCTAGTGGTAACGGCAGACTGTATGTAGCGTCACCAGACCTAGAGCCATTCTATGTGGAGATAGATGCAGAGTTCGACGAGATAACTGTAGAGAAAATCGACCTACAGATTCGAGACTTGGATGGTATAGACGAAGGCACAGAGAGCCAGTCCCGTCCGGTAACGCTAACAAATGAACACGACTACAACCTACGTAATCAGGGGTGGCCGTACCTTAATAATGTGACAGCGGTACAAGACCGTGAAGGTGGTAGCACAGCACAAGTTAAGCCTATAAATTACACCAAGCAAATACTGAACGTGTATCCATCAAACTCTGACCTTTACTATTTATGCAAGGCGCAGTCTGCGGAGATACCTCAAGCAATAAATGCATTCTCTCCTTATGTACTTGGAGACTTGCAGTTAGGTAATACGCCCGCACCTAAAGGGCATTATATTGTCGATGCATTCAATATCGACCGCGACCTAGCAGGGATAGAGGAAACGTTCCAACGCCCAAGAGCGACAGCGTTCTACTCAGGCCGTGCGTGGTGGTCAGGTGTGCAGGATAACAAACTGTCATCAACAGTATTCTTTAGCCAAGCAGGGCGAGACGCGAAACTATCAGGCCGATGCTACCAAGTAGCTGACCCTACAAGTGAGGAGATTAACGACCTTGTTGCTACTGACGGTGGTGTGATTACCGTGCAGGAAATGAGCGCAGTGATAGCCATGAGAACAATAGGCCAGTTCCTAGTACTGTTCGCTGATAATGGCGTGTGGTCTATCTCAGGTACGGATGGCTCAAACTTCTCAGCAGTGGATGCATCGGTATCCAAGGTATCTGAGAACGGGGCAATCTCAGCATCAAGTATTATTGAGCATGATGGCGGACTGTACTACTTTGGCAAGAGCGCGATATACCGTGTGGTACCTGACTCAGATGTTGCGATACAACTTACTGAGCAGAACTTGACTGAGGGTACAATCAAGAGCTTCTATCTAGGCATAGGGGGCAACGCTCTTACTACAGCTAAGGGTGTTAGTTCTACTCGTGACGGAAAGATATATTGGAACTTCCTAGAAGCAGGACAAGAGGACAGATATAATCTGAACCGACAGTTAATCCTAGATACCAATACGGGCGCATGGACTGTGTACCAGTATGGGTATGACCCTGACATCCGTGTTATGGGTATGGTGGACACTGCGGAGCTATTCCTTAGTACTATCAATGATGCGCTAGTGTACGACAGTAACGACGATGTGGTTACTGAGAGTGACGACAACACGCAGGTAACGGTTGAAGGTGGCTCAGAGATAAGCGAGACGGAGGGCGCAGGCAGTAAGATAGTATCTATTGTGAATGTAGACGGTGCCACTGGCATCCTGTACGGTGAGCTTACCTCACAAACGTTCACTGATTGGAGCACAAGAAGTAACTTGCCATATGAGCATTACTTTGAGATGGGCTTCAATGCTATGGGTGGTAATGCCACGAAAGGCTCTCCTGTGTACGTGAACAGCTTTTTCGCTAGGGACTTAGGGCTAACCTCAGATGAGGAGACTCCTGTCATTCCTGACCTACCTGAGAGAGAATCAGTGAGACTATTCAATACATACTGGCAAGTTTTGGAGAAACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f735a2007c0fba5427ea708bc11519ee4c314cb45a87651238aa846018189880
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5344
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank