Protein
View in Explore- Genbank accession
- BCG45078.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MAYGIWTQPVGPGPATPAPLFIDSGSTFPQFKNSIRGSFNFNGAGRSFPISGWDGSGQIVIVPTGSLCWQWEVPPNLVPDVYCVNNIYVENTSSFRVTLNQNPGGNPLFDCGFNVYQIWPRADRNYGITFSNTADYFSISDAGVVGQCIWAWQGVINNALQIPNIGGFNMTNAVVFANWSDGGLGLSYTSDDRVIRVYQNRPYVNGNTNEGGSVFARIAVFCNGAGVPEHNGGLNIYSPGTTQCVFSTNRTPFTVDTFIGSGGGNTGMSYPMIPLTSGIGAIKGRGSGWRYQQMRSHTMSGSSIGTGYGRYLFQWNQNYDLGADTVVNLSVPVINAAKVFAGL
- Physico‐chemical
properties -
protein length: 343 AA molecular weight: 36901,80540 Da isoelectric point: 6,69952 aromaticity: 0,13120 hydropathy: -0,10058
Domains
Domains [InterPro]
DC_1434
ATT
1–40
ATT
1–40
IPR045604
STR
22–316
STR
22–316
1
343
Architecture
ATT 1-40 | STR 41-316 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
343
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 91 | 91 | 0,0031 |
| Central domain | 92 | 290 | 200 | 0,0213 |
| C-terminal | 291 | 343 | 52 | 0,9973 |
Note: Constraints were applied during segmentation.
Fixed 91 C-terminal predictions appearing before Central domain
Fixed 91 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-91
1-91
Central
92-290
92-290
C-terminal
291-343
291-343
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage O18-011 [NCBI] |
2742113 | Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus O18011 |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
BCG45078.1
[NCBI]
Genbank nucleotide accession
LC553735
[NCBI]
CDS location
range 21637 -> 22668
strand -
strand -
CDS
ATGGCATATGGAATATGGACACAACCAGTAGGGCCGGGGCCAGCAACCCCCGCTCCCTTGTTTATTGATAGCGGAAGTACTTTCCCTCAGTTCAAGAATAGCATAAGAGGGAGTTTTAACTTCAATGGAGCCGGGAGATCTTTCCCTATTAGTGGATGGGATGGTAGTGGTCAGATAGTTATTGTTCCCACTGGTTCTCTATGCTGGCAATGGGAAGTCCCTCCTAACTTAGTCCCTGATGTTTATTGTGTAAATAACATCTATGTAGAAAATACCTCATCTTTTAGGGTGACTCTGAACCAGAATCCCGGCGGCAATCCTTTATTTGACTGTGGATTCAACGTCTACCAGATTTGGCCTAGAGCTGATAGAAACTATGGGATAACTTTCTCAAATACAGCAGACTACTTTTCCATATCAGATGCCGGGGTTGTTGGTCAATGCATTTGGGCTTGGCAGGGGGTCATAAACAATGCCCTTCAGATACCAAATATCGGTGGGTTCAATATGACCAATGCTGTTGTATTTGCTAATTGGTCTGATGGAGGACTCGGACTGTCTTATACCTCTGATGACAGAGTTATTCGTGTCTACCAGAACAGACCTTACGTAAACGGCAACACTAATGAGGGTGGTTCTGTGTTTGCTAGAATTGCAGTATTCTGCAACGGGGCAGGTGTTCCGGAACATAATGGAGGTTTAAATATCTACTCTCCGGGAACCACTCAATGTGTATTTTCTACTAACAGAACACCTTTTACTGTGGATACTTTTATAGGCTCAGGAGGTGGTAACACTGGAATGTCATATCCTATGATACCTCTTACTTCTGGAATAGGTGCAATAAAAGGCCGAGGTAGTGGATGGAGATATCAGCAAATGAGATCTCACACAATGAGTGGCTCTAGTATAGGAACTGGTTATGGAAGGTACTTATTTCAGTGGAATCAAAATTACGATCTAGGGGCTGACACTGTTGTTAACTTATCAGTTCCTGTAATAAACGCAGCTAAGGTTTTTGCTGGACTATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
83a3be61645f9cb461f36405d31c2304bdbf8924e2fe25dc112324872b67fa50
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Genomic and proteomic analysis of O18-011, a novel Escherichia coli phage | Shahin,K., Bao,H., Soleimani-Delfan,A. and Wang,R. | 2020-05-06 | — | GenBank |