Protein

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Genbank accession
YBB95425.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVSGTALTLDQIPSHNHIQGYGSNRIEGGRFGTASNQSSRQEEAFGGNPTSSAPYTSSVGGGQAHDHSVSINMPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:90 AA
molecular weight: 9436,25390 Da
isoelectric point:6,37491
aromaticity:0,07778
hydropathy:-0,35111

Domains

Domains [InterPro]
DC_0698
STR
2–90
DC_0698
SSF88874
STR
5–89
SSF88874
YBB95425.1
1 90
Architecture
STR
STR 2-90
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YBB95425.1
1 90
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0132
Central domain 11 79 70 0,0010
C-terminal 80 90 10 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-79
C-terminal
80-90

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_EG1
[NCBI] 		3453357 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YBB95425.1 [NCBI]
Genbank nucleotide accession
PV928965 [NCBI]
CDS location
range 34844 -> 35116
strand -
CDS
ATGGTCAGTGGTACTGCCCTGACGCTGGATCAAATACCCAGCCACAACCACATCCAGGGTTATGGTAGTAACAGGATTGAAGGTGGTAGGTTCGGTACCGCATCTAATCAGTCATCTAGACAAGAGGAAGCCTTCGGTGGTAATCCTACATCGAGCGCCCCCTACACTAGCTCTGTTGGTGGTGGTCAAGCACACGACCACTCAGTATCCATTAACATGCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
751a8ce50889204893969d60b829f4c50b64c4992f759232b337d72330d40656
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6703
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic Characterization of Lytic Bacteriophages Targeting Pseudomonas aeruginosa Ismail,G.H., Elariny,E.Y.T., Abdel-Haliem,M.E.F., Sobhy,N.M., Youssef,C.R.B. and Tartor,Y.M.H. — — GenBank