Protein

View in Explore
Genbank accession
YP_010064535.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGTLDPWINSSTGDGYRNSVVAIPGDGVKTAFDFNFGGGYIDKSHIKVYTYDTRTGHTETVAFSWLGPNTIQVLPAPPSYIHVVIYRDTPKSQPLVDFTTNASMTEKNLDLMARQAIFAAAEMVDRFDSINAGSSEAIERSLVALDTANSAKAEAQAATATANAATATANTATSTAAAAVGTANNALSVAQGIDAKAQQALDNSLGATNIATNAQSIAQGIDAKATQAINTANSANTKADQALATASGKRDGVWYSYVGSGTGGLAIMRGTVANPGQPVWQFYSDPNGSSAIAHYNDSGIPDWTPIGFNQVDKRLTFSSNVWMDFGTSRLSNVGDPVASGDAATRGWTEARYAHLNGGGTNPMQTIPWDDYQAVGGYAVGLTYRNNGADKAGIGAYGSVGNGWGNALYFGTGANFWNVTDPTSRGLYVQPAGNTLKGNTKVEGDITATTTAHIGSGLYIGETLGTNGNAALEIGSLSGVGTPFIDFHSSGTGSDFDARIIASGGNATAGQGFLSVQAAQGMACSGPVSGTSDERLKKDWQDIPEDTVDKLAEVLAGGYTHIESGAARIGVSAQSLYKVFPRAVGENIDGMLMVSYGEAALVAAVALARRVVKLEKRISTLEAR
Physico‐chemical
properties
protein length:623 AA
molecular weight: 64592,57120 Da
isoelectric point:5,06580
aromaticity:0,08026
hydropathy:-0,17368

Domains

Domains [InterPro]
DC_1263
ATT
1–295
DC_1263 DC_0971
IPR005604
ATT
18–126
IPR005604 IPR030392
IPR030392
CHP
531–583
IPR030392 Coil
YP_010064535.1
1 623
Architecture
ATT
RBD
ATT 1-295 | RBD 306-623
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010064535.1
1 623
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9921
Central domain 161 359 200 0,3312
C-terminal 360 623 263 0,8182
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-359
C-terminal
360-623

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Anchaing
[NCBI] 		2759719 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010064535.1 [NCBI]
Genbank nucleotide accession
NC_054891.1 [NCBI]
CDS location
range 10267 -> 12138
strand -
CDS
ATGGGCACACTGGACCCGTGGATCAACTCGTCCACCGGGGACGGCTACCGGAACTCCGTGGTAGCGATCCCTGGTGACGGGGTAAAGACCGCATTCGATTTCAACTTTGGTGGCGGCTACATCGATAAGTCGCACATCAAGGTGTACACGTACGACACGCGCACCGGCCACACGGAGACTGTGGCGTTCTCATGGCTCGGCCCGAACACCATTCAGGTGCTCCCGGCCCCGCCCTCGTACATCCACGTCGTGATTTACCGCGACACCCCAAAGTCTCAGCCGTTGGTCGACTTCACCACCAACGCGAGCATGACGGAGAAGAACCTCGACCTCATGGCGCGACAAGCGATCTTCGCCGCCGCAGAAATGGTTGACCGGTTCGATTCGATTAACGCAGGCTCCTCTGAGGCAATTGAGCGAAGCCTCGTTGCGCTCGATACGGCAAACAGCGCGAAGGCAGAGGCACAGGCAGCAACGGCCACCGCGAACGCAGCGACCGCCACCGCGAACACGGCGACGTCCACCGCAGCCGCCGCAGTGGGCACCGCGAACAACGCGCTGTCCGTTGCCCAAGGCATCGACGCCAAGGCGCAGCAAGCGCTGGACAACTCGCTCGGTGCTACCAACATCGCCACCAATGCGCAGAGCATTGCCCAAGGCATCGACGCCAAGGCTACTCAGGCCATCAACACTGCCAACTCTGCCAACACCAAGGCCGATCAGGCCCTTGCCACGGCGAGCGGCAAGCGGGACGGCGTGTGGTACTCGTACGTGGGCTCGGGGACGGGCGGCCTCGCAATCATGCGCGGTACGGTTGCGAACCCTGGACAGCCCGTCTGGCAGTTCTACAGCGACCCTAACGGATCGTCTGCCATTGCCCATTACAACGACTCAGGAATCCCCGACTGGACACCCATCGGATTCAATCAGGTGGACAAGCGGCTGACGTTTAGCAGCAACGTTTGGATGGACTTCGGCACGTCCCGCCTCTCGAACGTGGGCGACCCAGTTGCAAGCGGGGACGCGGCGACACGCGGCTGGACGGAGGCCCGCTACGCCCACCTGAACGGCGGCGGCACCAACCCGATGCAGACCATCCCGTGGGATGACTACCAAGCTGTCGGCGGCTACGCCGTGGGTCTGACCTACCGGAACAACGGGGCGGATAAGGCAGGCATCGGCGCGTACGGCTCTGTGGGTAATGGGTGGGGCAACGCACTCTACTTCGGGACCGGCGCCAACTTCTGGAACGTCACTGACCCCACTAGCCGGGGCCTGTATGTTCAACCTGCCGGGAACACGCTCAAGGGCAATACCAAGGTGGAGGGCGACATCACTGCCACGACGACCGCGCACATCGGGTCTGGCCTCTACATCGGTGAGACTCTAGGCACAAACGGAAACGCGGCGCTGGAGATTGGCAGCCTGAGCGGAGTAGGTACGCCGTTCATCGATTTCCACTCCTCCGGCACCGGCAGCGACTTCGATGCGCGAATCATTGCAAGCGGGGGTAACGCAACCGCTGGTCAGGGCTTCCTCAGCGTGCAGGCTGCGCAGGGTATGGCCTGTTCCGGCCCTGTGTCTGGTACGTCGGACGAGCGGTTGAAGAAGGACTGGCAGGACATCCCCGAGGACACGGTGGACAAGCTGGCAGAGGTTCTGGCTGGCGGGTACACGCACATCGAGAGCGGTGCAGCTCGCATTGGCGTGAGCGCGCAGAGCCTTTACAAGGTATTCCCCCGCGCAGTGGGCGAGAACATCGACGGCATGCTGATGGTTTCGTATGGTGAGGCTGCCCTGGTAGCGGCTGTCGCGCTGGCTCGTCGAGTCGTCAAGCTGGAGAAGCGCATCAGTACGCTGGAGGCACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b85da2217968c08a86f4b1d9cdaca8f9217ab4a49b678cce541f0e8e2c64f37c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6824
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank