Protein

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Genbank accession
YP_009851482.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MINVSGFGTGIVIVSASSFPMGFSLSKFADDESPISSKELEPFGYEMLYDGGLFAFDKAAPLEVSVSVIAGSEDDINLRILLNSKKGSFRFLPGIIPDMTTLVATLPDGGRTVLSNGTILKGPAIDTIQNTGRRKGNTYTFVFGSYLGAQTARQAISNVIQSVLEVV
Physico‐chemical
properties
protein length:167 AA
molecular weight: 17735,05340 Da
isoelectric point:4,89670
aromaticity:0,08982
hydropathy:0,21976

Domains

Domains [InterPro]
IPR054440
STR
2–146
IPR054440
IPR054440
STR
2–145
IPR054440
YP_009851482.1
1 167
Architecture
STR
STR 2-146 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA8P1
[NCBI] 		2848039 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PA8P1 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009851482.1 [NCBI]
Genbank nucleotide accession
NC_048806.1 [NCBI]
CDS location
range 28933 -> 29436
strand +
CDS
ATGATCAACGTCAGCGGCTTCGGCACAGGAATTGTAATAGTTTCCGCCTCATCGTTCCCGATGGGGTTTTCCTTGTCGAAGTTCGCTGATGATGAGAGTCCGATATCCTCCAAAGAGCTGGAGCCGTTCGGATATGAGATGCTTTATGACGGCGGCCTATTCGCCTTTGACAAGGCTGCTCCTCTGGAAGTATCTGTATCCGTCATCGCAGGGAGCGAGGATGATATTAACCTTCGCATCCTTCTCAATTCCAAAAAGGGATCATTCAGATTTCTTCCGGGAATCATCCCGGACATGACGACTCTCGTGGCCACTCTTCCTGATGGCGGCCGCACCGTTCTGTCCAATGGGACCATCCTCAAGGGTCCGGCCATCGACACCATACAGAACACCGGACGGCGCAAAGGCAACACGTACACTTTTGTTTTCGGTAGCTATCTTGGCGCCCAGACTGCGCGTCAAGCCATTTCTAACGTTATCCAATCGGTACTGGAGGTGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5da3b2fb7b6a556cfcaf639975c15e68fb944f326eeb83ab84b671d5afc199ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6525
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomic characterization of four Pseudomonas aeruginosa specific phages belonging to genus Pbunavirus Pulkkinen,E., Hietikko,A., Patinen,T., Skurnik,M. and Kiljunen,S. 1981-01-01 — GenBank