Protein
View in Explore- Genbank accession
- BEH87966.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MSGWCEVGGNSTAIWALDKAKIDGRKIFRYDGFAANAITSSSQPCRLVRKSGTTGYINLKCENYKNIAGLGLTSGATALTIRPWLAIADIPNGSSTIHPE
- Physico‐chemical
properties -
protein length: 100 AA molecular weight: 10661,02500 Da isoelectric point: 9,18251 aromaticity: 0,08000 hydropathy: -0,13500
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
100
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0056 |
| Central domain | 11 | 89 | 80 | 0,0084 |
| C-terminal | 90 | 100 | 10 | 0,9737 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Sequence started with non-N-terminal domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-89
11-89
C-terminal
90-100
90-100
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage phiKp_21 [NCBI] |
2979978 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
BEH87966.1
[NCBI]
Genbank nucleotide accession
LC768484
[NCBI]
CDS location
range 3943 -> 4245
strand -
strand -
CDS
GTGTCTGGTTGGTGTGAAGTTGGAGGAAATAGTACAGCAATATGGGCCTTAGATAAAGCAAAAATTGATGGCAGGAAAATATTTAGATATGATGGTTTCGCGGCGAATGCAATAACGTCTTCTTCTCAACCATGTAGACTAGTACGAAAATCTGGTACTACTGGATATATTAATTTAAAATGTGAGAATTATAAGAATATTGCTGGACTTGGGTTAACTTCAGGGGCTACAGCGTTAACAATAAGACCTTGGTTAGCTATTGCAGATATTCCAAATGGGTCAAGTACTATTCATCCAGAATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
b76a2c392189f3845dda2f0218b74306f521ef703256a888aaa4ea838b091b7d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Genome of Klebsiella phage phiKp_21 | Kondo,K., Nakano,S., Hisatsune,J., Sugawara,Y., Kataoka,M., Kayama,S., Sugai,M. and Kawano,M. | 1959 | — | GenBank |