Protein

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Genbank accession
YP_006988357.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,83
Protein sequence
MADPISFAVGTVATMGVSYLFPSEGPRIKDLKISASTYGAQIPNVFGVTRVPGNMIWSNKIREKKRKKMVGKGGFYNQYQYFCTFAMGFCYGPITMLRKLWADGKLIFDASGESELETKHNYKLNIYTGSEEQYPDPIMESIVGEGNTPAYRGLCYVVFDDMPLDDFGNRIPQLTAEVFNGEGVIVADGPDIVFQNPEPEENTGDNRPPVSSTYQINQIGVDTFGGYFYLIDKDHPLPIIRQFRISDGQECGRFQFVTPRTDFCYEFSYDSQTIDQIVGVTPRGELLCSISLNNNVAYCMIDLITGDLGVHGTTDPFGGRNCGYGTGTPPGNGSNYHAISVSSSGMAELGISGLFGDVSIYDCTSILAFNANPQQTATTHYGRSSVIVGAYGASTCHFFLPHVDSENSNVITIKRATRSYDQIGVSDVGFIQPFGPQDPNYGFGHIIVFNAVYDTTDGGVLVMFTARKADGTNGEYFAKWSGITGRQLWVKEVPIEAPGVYPRVGTAHQGQYAFVLPLNSHVLYPTVWIIDTMTGDWKAMSVSEQPSFVSYTDETESEVIVDQAAYTGYPIKDTVFIGYDMQYYDPVRQAVITLGSGGTDKIVKIGPEIGSTTLGAIVRSVLKRGGLTNQHMDMSRLESTHVWGYGWAAATDIKSVLEELQRVYLFDIVESEGKLVGVMRSTGSDEDFPGSTVVTIKQGALGSTSPELADFWQETRIQEADLPAKINFTYMNLDADYQPATAYSKRISDPAPTMFSSQQVAIEINIVMKPSEAKTQANRALYAQWAERTMHKTILPWAYLRLDPADLITVEMDDGRSYRERLHHTEIGADFSIQSETYGQDSGAYDIVREGDGGGVPSQPIKAPGTITGFIINTPLLRDQDDTGGSSSRYYAALGNASGDGWRGGELWRAESLPNFDQIDTPINEAEWGHVASILPPPRHGHFALDWENKLTIWPGVKWFELDSITDDELWAGGNAALVGDEVIQFRDVRENDDGSWTVWNLLRGRRGTEYATHTHKQSEKFLYLLNENSIAPEGEMIDTRGQKRYYKAVAYGRTIAETPLITVDYEPRDLMPYAPKDIRREFTSDGRIEVSWARRTRMGGNMQDYVGEVPVNEAAEKYEVYFYKTPFIGDLSRGGQVQPDYFHSAVVTEPHYSFLPDPTQFASNLDTLTVVVYQISATVGRGFPGTRDIEPWQDF
Physico‐chemical
properties
protein length:1196 AA
molecular weight: 132656,80500 Da
isoelectric point:4,82003
aromaticity:0,11371
hydropathy:-0,33244

Domains

Domains [InterPro]
DC_1879
ATT
1–246
DC_1879 IPR032876 IPR056490 DC_0263
DC_2254
STR
686–926
DC_2254
YP_006988357.1
1 1196
Architecture
ATT
ATT
STR
RBD
RBD
ATT 1-246 | ATT 651-822 | STR 823-926 | RBD 927-1022 | RBD 1025-1193 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006988357.1
1 1196
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,7323
Central domain 249 447 200 0,5537
C-terminal 448 1196 748 0,1493
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-447
C-terminal
448-1196

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage CcrColossus
[NCBI] 		1211640 Uroviricota > Caudoviricetes > Jeanschmidtviridae > Colossusvirus colossus >
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006988357.1 [NCBI]
Genbank nucleotide accession
NC_019406 [NCBI]
CDS location
range 89361 -> 92951
strand +
CDS
ATGGCCGATCCTATTTCGTTTGCCGTCGGCACGGTCGCCACCATGGGGGTGAGCTACCTGTTCCCGTCCGAAGGTCCGCGCATCAAGGACTTGAAGATCAGCGCCTCGACGTACGGAGCCCAGATTCCGAATGTCTTCGGGGTCACGCGCGTGCCCGGCAACATGATCTGGTCGAACAAGATTCGTGAAAAGAAGCGCAAGAAGATGGTTGGGAAGGGCGGCTTCTACAACCAATATCAATATTTCTGCACGTTCGCGATGGGCTTTTGCTACGGGCCGATCACGATGCTTCGCAAGCTCTGGGCTGACGGCAAGCTCATCTTTGATGCGAGCGGAGAGTCTGAGCTTGAGACTAAGCATAACTATAAGCTGAACATCTACACGGGCAGCGAAGAGCAGTACCCCGATCCGATCATGGAGTCGATCGTCGGTGAGGGTAACACGCCGGCATATCGCGGCCTGTGCTATGTCGTGTTCGACGACATGCCACTCGACGATTTTGGTAATCGTATTCCGCAGTTGACCGCCGAAGTCTTCAATGGCGAAGGTGTCATTGTCGCGGACGGTCCTGATATTGTTTTCCAGAATCCGGAACCGGAAGAGAACACTGGCGACAATCGACCGCCTGTAAGCAGCACCTATCAGATCAACCAGATCGGCGTCGACACTTTCGGCGGCTATTTCTACCTGATCGACAAGGATCACCCGCTGCCCATTATTCGTCAATTCCGAATTTCGGATGGTCAAGAGTGCGGGCGATTCCAGTTTGTAACTCCGCGAACTGATTTCTGCTATGAGTTCAGCTACGACTCCCAGACGATTGATCAGATCGTCGGGGTTACCCCTCGGGGCGAACTCTTGTGCTCGATCAGCCTGAACAACAACGTTGCTTACTGCATGATCGACCTGATCACCGGTGATCTAGGCGTACACGGGACCACGGACCCTTTTGGCGGACGCAATTGCGGATACGGTACCGGCACGCCGCCGGGCAACGGCTCAAACTATCACGCAATCTCTGTCAGCAGTTCCGGCATGGCCGAGTTGGGGATCAGCGGCCTCTTCGGAGATGTCTCTATTTACGACTGCACCAGTATTTTGGCGTTTAATGCGAATCCTCAGCAGACGGCAACCACGCACTATGGGCGTTCTTCAGTTATTGTGGGCGCGTACGGTGCGTCGACCTGCCATTTCTTCTTGCCGCACGTAGATTCCGAAAACTCGAACGTCATCACGATTAAGCGCGCTACGCGCAGCTACGACCAAATCGGCGTATCTGATGTGGGATTTATTCAACCCTTTGGACCTCAGGACCCCAATTACGGGTTCGGGCATATCATCGTTTTCAACGCGGTCTACGACACCACGGACGGCGGCGTGCTCGTGATGTTCACGGCGCGTAAGGCGGACGGCACGAACGGCGAATACTTTGCAAAGTGGTCGGGTATCACTGGCCGGCAGCTTTGGGTCAAGGAAGTGCCGATCGAAGCGCCGGGCGTCTATCCGCGCGTCGGCACTGCGCACCAGGGGCAATATGCCTTCGTGCTGCCCCTGAATTCGCACGTACTGTATCCGACTGTCTGGATCATCGACACGATGACGGGTGATTGGAAGGCGATGTCGGTCTCCGAGCAGCCGTCCTTCGTGAGCTATACCGATGAAACGGAGAGCGAAGTGATCGTCGATCAGGCAGCCTACACGGGCTACCCGATCAAGGATACGGTGTTCATTGGCTACGATATGCAGTATTACGACCCGGTCCGGCAAGCGGTCATCACGCTCGGCTCCGGAGGTACTGACAAGATCGTCAAGATCGGTCCGGAGATTGGTTCGACGACTCTCGGCGCGATCGTGCGCAGCGTGCTCAAGCGGGGAGGCCTTACCAACCAGCACATGGACATGTCGCGCCTGGAGTCAACTCATGTCTGGGGGTACGGGTGGGCCGCCGCGACCGACATCAAGTCGGTCCTGGAAGAACTCCAACGCGTTTACCTCTTCGATATCGTCGAGAGCGAAGGCAAGCTGGTCGGCGTGATGCGGTCTACGGGTTCCGATGAGGATTTCCCTGGCTCGACGGTCGTGACCATCAAGCAGGGCGCCCTGGGCTCCACTAGCCCCGAACTCGCCGACTTCTGGCAAGAGACCCGCATCCAGGAAGCGGACCTGCCGGCGAAGATCAACTTCACCTACATGAACCTGGACGCGGACTACCAGCCCGCTACCGCCTACTCCAAGCGGATCAGCGACCCGGCTCCGACGATGTTCTCCTCGCAGCAGGTGGCGATCGAGATCAACATCGTCATGAAGCCGTCCGAGGCCAAGACCCAGGCAAACCGTGCGCTCTACGCCCAATGGGCCGAGCGCACGATGCACAAGACGATCCTACCCTGGGCCTATCTGCGCCTGGACCCGGCGGACCTGATCACCGTCGAGATGGATGACGGTCGTTCCTATCGGGAGCGCTTGCATCATACCGAGATCGGCGCCGACTTCTCCATCCAGTCCGAAACCTACGGGCAGGACAGTGGAGCCTATGACATCGTCCGTGAAGGCGATGGCGGCGGCGTGCCTTCTCAGCCTATCAAGGCGCCCGGCACGATCACCGGCTTCATCATCAACACGCCCCTCTTGCGGGACCAGGACGATACCGGCGGGTCCTCCAGCCGCTATTACGCGGCGCTCGGCAACGCGAGCGGTGACGGGTGGCGCGGCGGGGAACTGTGGCGCGCAGAATCGCTTCCCAACTTCGATCAGATCGATACGCCGATCAACGAGGCTGAATGGGGTCATGTCGCGAGCATCTTGCCGCCGCCGCGTCACGGTCATTTCGCCTTGGATTGGGAAAACAAGCTCACGATCTGGCCCGGCGTAAAGTGGTTCGAACTCGATTCGATCACCGACGACGAACTGTGGGCCGGCGGAAATGCGGCGCTTGTTGGCGATGAGGTGATCCAATTCCGTGACGTGCGCGAGAATGACGACGGCTCCTGGACCGTCTGGAATCTGTTGCGCGGTCGGCGGGGGACGGAATACGCAACCCACACCCATAAGCAGAGCGAAAAGTTCCTGTACTTGCTGAACGAGAATTCTATCGCTCCCGAAGGAGAAATGATCGACACGCGTGGACAGAAGCGCTACTATAAGGCCGTCGCTTATGGTCGGACGATCGCGGAAACGCCGCTGATCACCGTCGACTACGAGCCTCGCGATCTGATGCCGTATGCTCCCAAGGACATCCGGCGCGAATTCACCTCTGACGGACGCATCGAAGTTTCCTGGGCGCGACGTACGCGCATGGGCGGCAACATGCAGGATTACGTGGGCGAGGTCCCTGTAAACGAGGCTGCCGAGAAGTACGAGGTCTATTTCTACAAGACCCCCTTCATTGGTGATCTGTCGCGCGGCGGGCAGGTTCAGCCTGACTATTTCCACTCGGCGGTGGTCACTGAACCGCACTACAGCTTCCTGCCCGATCCGACCCAATTTGCCAGTAATCTTGACACGTTGACGGTCGTGGTTTACCAAATTTCTGCGACGGTCGGTCGTGGATTCCCAGGCACTCGCGATATCGAACCCTGGCAGGACTTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c6bde293ac07dcfc2556caf9dffcf6ded9e1084980d0896f82913b698df20c78
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50